RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SLC9A2Q9UBY0 812 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 WDR64B1ANS9 1081 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ZNF862O60290 1169 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 EYA4O95677 639 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 QARSP47897 775 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 COASYQ13057 564 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CRHR2Q13324 411 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 DPP9Q86TI2 863 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 CCDC60Q8IWA6 550 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ADSSL1Q8N142 457 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TC2NQ8N9U0 490 aa14.03□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MAFGO15525 162 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 MYL1P05976 194 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 STIM1Q13586 685 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 KRT31Q15323 416 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 TRIM65Q6PJ69 517 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ARMCX2Q7L311 632 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 NACC1Q96RE7 527 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 ZSWIM4Q9H7M6 989 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 PCDHA10Q9Y5I2 948 aa14.02□□□□□ -0.16
CDK5RAP3-217ENST00000580287 RBBP6Q7Z6E9 1792 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ARHGAP6O43182 974 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CASP5P51878 434 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KRT76Q01546 638 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZNF792Q3KQV3 632 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 APTXQ7Z2E3 356 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 REXO1L1PQ8IX06 675 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 NPLOC4Q8TAT6 608 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCDC47Q96A33 483 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TRIM47Q96LD4 638 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 WDR24Q96S15 920 aa14.02□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KCNJ18B7U540 433 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 AKR1B15C9JRZ8 316 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 BACH1O14867 736 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SLU7O95391 586 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GGPS1O95749 300 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 YWHABP31946 246 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 COPB2P35606 906 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 RBL2Q08999 1139 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KCNJ12Q14500 433 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 HSDL1Q3SXM5 330 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 C1orf186Q6ZWK4 172 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZNF784Q8NCA9 323 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GTF3C2Q8WUA4 911 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 IKZF4Q9H2S9 585 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ST7Q9NRC1 585 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCP110O43303 1012 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TLR2O60603 784 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 STAM2O75886 525 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 URI1O94763 535 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SOX10P56693 466 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 EHHADHQ08426 723 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PRAMEF19Q5SWL8 479 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ANO5Q75V66 913 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PLEKHH3Q7Z736 793 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 NELFCDQ8IXH7 590 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CDHR1Q96JP9 859 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TRPM7Q96QT4 1865 aa14.01□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PVALEFA0A1B0GWK0 134 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SOWAHDA6NJG2 315 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 RBAK-RBAKDNI3L0D1 243 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PSMA7O14818 248 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 FARP2O94887 1054 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CTGFP29279 349 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ICAM3P32942 547 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KCNJ6P48051 423 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ETF1P62495 437 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ANKRD40Q6AI12 368 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 C17orf99Q6UX52 265 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ABHD15Q6UXT9 468 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SFR1Q86XK3 245 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KSR1Q8IVT5 923 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GPRC5CQ9NQ84 441 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KCND1Q9NSA2 647 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PPP2R2CQ9Y2T4 447 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 DOCK5Q9H7D0 1870 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ARHGEF35A5YM69 484 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 USO1O60763 962 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CASP14P31944 242 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 RARRES1P49788 294 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 JAK3P52333 1124 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PSMC5P62195 406 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SPAG1Q07617 926 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KCNA1Q09470 495 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TCP11X2Q5H9J9 407 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CNNM4Q6P4Q7 775 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TRIM50Q86XT4 487 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SEMA6BQ9H3T3 888 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PCDHA2Q9Y5H9 948 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ADGRA2Q96PE1 1338 aa14□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms