RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 THNSL2Q86YJ6 484 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 FBXO41Q8TF61 875 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 DHRS1Q96LJ7 313 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 PDGFDQ9GZP0 370 aaPredicted RBP3.97□□□□□ -1.77
KPNB1-208ENST00000580019 GP6Q9HCN6 339 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 PARPBPQ9NWS1 579 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 CEP72Q9P209 647 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 ARAP1Q96P48 1450 aa3.97□□□□□ -1.77
KPNB1-208ENST00000580019 E2F8A0AVK6 867 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 SHTN1A0MZ66 631 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 GOLGA6CA6NDK9 693 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 GOLGA6BA6NDN3 693 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 TNFRSF10CO14798 259 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 DIAPH1O60610 1272 aaKnown RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 PDE8AO60658 829 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 RFPL3O75679 317 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 HSP90AA1P07900 732 aaKnown RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 GOLGA6DP0CG33 693 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 NME1P15531 152 aaKnown RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 POU3F3P20264 500 aaPredicted RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 CRKP46108 304 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 SLC6A11P48066 632 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 RAC3P60763 192 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 SCRN1Q12765 414 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 MAPK7Q13164 816 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 C21orf62-AS1Q17RA5 79 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 ZNF568Q3ZCX4 644 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 ANKRD39Q53RE8 183 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 WDR78Q5VTH9 848 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 CPNE8Q86YQ8 564 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 REXO1Q8N1G1 1221 aaKnown RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 ZNF808Q8N4W9 903 aaPredicted RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 RBBP8NLQ8NC74 664 aaPredicted RBP3.96□□□□□ -1.78
KPNB1-208ENST00000580019 PLEKHO2Q8TD55 490 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 PPM1EQ8WY54 764 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 SLC39A13Q96H72 371 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 AJUBAQ96IF1 538 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 ZDHHC15Q96MV8 337 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 SENP7Q9BQF6 1050 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 LRRC3Q9BY71 257 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 GOLGA6AQ9NYA3 693 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 ANAPC4Q9UJX5 808 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 MAPRE3Q9UPY8 281 aa3.96□□□□□ -1.78
KPNB1-208ENST00000580019 TRBV23OR9-2A0A075B6M9 112 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 A0A087X0B3 334 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 ZAR1LA6NP61 321 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 C9IYK1 514 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 NPHP1O15259 732 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 TLR3O15455 904 aaKnown RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 KLHL18O94889 574 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 SCGB1D2O95969 90 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 FOSP01100 380 aaPredicted RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 COL6A1P12109 1028 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 HIBADHP31937 336 aaKnown RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 CSF2RBP32927 897 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 POU5F1BQ06416 359 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 MCL1Q07820 350 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 FOXD4Q12950 439 aaPredicted RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 SLC4A10Q6U841 1118 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 SPATC1Q76KD6 591 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 EEPD1Q7L9B9 569 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 C14orf80Q86SX3 495 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 FAM178BQ8IXR5 827 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 PAF1Q8N7H5 531 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 TTC8Q8TAM2 541 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 SMARCC1Q92922 1105 aaPredicted RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 TOE1Q96GM8 510 aaKnown RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 ARPC5LQ9BPX5 153 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 FAM126AQ9BYI3 521 aaPredicted RBP3.95□□□□□ -1.78
KPNB1-208ENST00000580019 BRMS1Q9HCU9 246 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 SWAP70Q9UH65 585 aa3.95□□□□□ -1.78
KPNB1-208ENST00000580019 KIF21AQ7Z4S6 1674 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 NCAPD3P42695 1498 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 A0A0U1RQG5 324 aaPredicted RBP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 C7orf72A4D263 438 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 IQCA1LA6NCM1 817 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 AURKAO14965 403 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 FGAP02671 866 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 CD53P19397 219 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 CR2P20023 1033 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 SEPHS1P49903 392 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 RAB27AP51159 221 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 NEK2P51955 445 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 PABPC4Q13310 644 aaKnown RBP eCLIP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 MORC3Q14149 939 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 GRM7Q14831 915 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 LRRC41Q15345 812 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 KSR2Q6VAB6 950 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 KRBA2Q6ZNG9 492 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 DDX46Q7L014 1031 aaKnown RBP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 GPR155Q7Z3F1 870 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 NECAB2Q7Z6G3 386 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 GRASPQ7Z6J2 395 aaPredicted RBP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 RNF180Q86T96 592 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 PASD1Q8IV76 773 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 LRRC47Q8N1G4 583 aaKnown RBP3.94□□□□□ -1.78
KPNB1-208ENST00000580019 TMTC2Q8N394 836 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 UBR7Q8N806 425 aa3.94□□□□□ -1.78
KPNB1-208ENST00000580019 C19orf47Q8N9M1 422 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms