RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
GGA3-205ENST00000578348 RNF10Q8N5U6 811 aaKnown RBP12.53□□□□□ -0.4
GGA3-205ENST00000578348 KCTD17Q8N5Z5 321 aa12.53□□□□□ -0.4
GGA3-205ENST00000578348 SH3GL2Q99962 352 aa12.53□□□□□ -0.4
GGA3-205ENST00000578348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
GGA3-205ENST00000578348 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
GGA3-205ENST00000578348 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
GGA3-205ENST00000578348 ESYT3A0FGR9 886 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 ZSCAN5CA6NGD5 496 aaPredicted RBP12.52□□□□□ -0.41
GGA3-205ENST00000578348 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 SERPING1P05155 500 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 CYP11B2P19099 503 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 CCT5P48643 541 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 GNGT1P63211 74 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 RASA3Q14644 834 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
GGA3-205ENST00000578348 TBC1D5Q92609 795 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 ARL8AQ96BM9 186 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.52□□□□□ -0.41
GGA3-205ENST00000578348 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 PACSIN2Q9UNF0 486 aaPredicted RBP12.52□□□□□ -0.41
GGA3-205ENST00000578348 LTBP3Q9NS15 1303 aa12.52□□□□□ -0.41
GGA3-205ENST00000578348 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 PHF20L1A8MW92 1017 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 CFBP00751 764 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 GLI1P08151 1106 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 KLRC1P26715 233 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 TTMPQ5BVD1 217 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 CATSPER3Q86XQ3 398 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 CAVIN3Q969G5 261 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 NUCKS1Q9H1E3 243 aaKnown RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.416e-6■□□□□ 10.8
GGA3-205ENST00000578348 IGLV3-22A0A075B6J6 115 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 NPHP3-ACAD11A0A0J9YXS1 232 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 FRMD3A2A2Y4 597 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 CARSP49589 748 aaKnown RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 RNASE9P60153 205 aaKnown RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 GUCY2DQ02846 1103 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 TEPSINQ96N21 525 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 ZIM3Q96PE6 472 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 POLR3CQ9BUI4 534 aaPredicted RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 DEFB129Q9H1M3 183 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 EPB41L5Q9HCM4 733 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
GGA3-205ENST00000578348 ADAMTS1Q9UHI8 967 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 DNM3Q9UQ16 869 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 GRIN2DO15399 1336 aa12.51□□□□□ -0.41
GGA3-205ENST00000578348 KRT14P02533 472 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 SPATA31C1P0DKV0 1188 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 EPS15P42566 896 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 PTGER2P43116 358 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 NAB2Q15742 525 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 GLE1Q53GS7 698 aaKnown RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 KCTD16Q68DU8 428 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 GBP6Q6ZN66 633 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 LDHDQ86WU2 507 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 SYT2Q8N9I0 419 aaPredicted RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 LPAR1Q92633 364 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 PACSIN1Q9BY11 444 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 ZHX3Q9H4I2 956 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 PCDHA2Q9Y5H9 948 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 A0A087X0T9 212 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 WDR46O15213 610 aaKnown RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.414e-7■■■■□ 20.1
GGA3-205ENST00000578348 KRT18P05783 430 aaKnown RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 FAM153BP0C7A2 387 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 FAM228BP0C875 321 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 KLHL30Q0D2K2 578 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 SLC18A3Q16572 532 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 FAM153CQ494X1 144 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 TTC31Q49AM3 519 aaPredicted RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 HERC4Q5GLZ8 1057 aaPredicted RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 PACS2Q86VP3 889 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 SYN2Q92777 582 aaPredicted RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
GGA3-205ENST00000578348 KRT12Q99456 494 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
GGA3-205ENST00000578348 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms