RNA–Protein interactions for RNA: ENST00000577926.1

CACNB1-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 427 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-208ENST00000577926 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
CACNB1-208ENST00000577926 METTL13Q8N6R0 699 aa11.78□□□□□ -0.52
CACNB1-208ENST00000577926 DBF4BQ8NFT6 615 aa11.78□□□□□ -0.52
CACNB1-208ENST00000577926 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
CACNB1-208ENST00000577926 OSBPL7Q9BZF2 842 aa11.78□□□□□ -0.52
CACNB1-208ENST00000577926 TTYH1Q9H313 450 aaPredicted RBP11.78□□□□□ -0.52
CACNB1-208ENST00000577926 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
CACNB1-208ENST00000577926 SMC3Q9UQE7 1217 aa11.78□□□□□ -0.52
CACNB1-208ENST00000577926 KIF28PB7ZC32 967 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 MCM7P33993 719 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 PSMC5P62195 406 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 LPIN1Q14693 890 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 MTERF2Q49AM1 385 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 TSHZ1Q6ZSZ6 1077 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 PHOSPHO2Q8TCD6 241 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 APBB2Q92870 758 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 NKX2-4Q9H2Z4 354 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 MTMR10Q9NXD2 777 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 NOL7Q9UMY1 257 aaKnown RBP11.77□□□□□ -0.53
CACNB1-208ENST00000577926 GINS2Q9Y248 185 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
CACNB1-208ENST00000577926 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.77□□□□□ -0.53
CACNB1-208ENST00000577926 PCDHA11Q9Y5I1 949 aa11.77□□□□□ -0.53
CACNB1-208ENST00000577926 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 H3BQV1 296 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 MAGEB2O15479 319 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 DKC1O60832 514 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNB1-208ENST00000577926 AMHP03971 560 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 MYOGP15173 224 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 TXKP42681 527 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 QARSP47897 775 aaKnown RBP11.76□□□□□ -0.53
CACNB1-208ENST00000577926 CLCN3P51790 818 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 SPIRE1Q08AE8 756 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 TBC1D8BQ0IIM8 1120 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 FBXO47Q5MNV8 452 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 TTC38Q5R3I4 469 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 PLA2G4FQ68DD2 849 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 MCTP1Q6DN14 999 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 TMCO2Q7Z6W1 182 aaPredicted RBP11.76□□□□□ -0.53
CACNB1-208ENST00000577926 KIAA0319LQ8IZA0 1049 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 MYOCDQ8IZQ8 938 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 NME8Q8N427 588 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 GUCD1Q96NT3 240 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 PPP1R16BQ96T49 567 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 LXNQ9BS40 222 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 CELF4Q9BZC1 486 aaKnown RBP11.76□□□□□ -0.53
CACNB1-208ENST00000577926 TMEM60Q9H2L4 133 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 SEMA6BQ9H3T3 888 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 TTC12Q9H892 705 aaPredicted RBP11.76□□□□□ -0.53
CACNB1-208ENST00000577926 PCDHA12Q9UN75 941 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
CACNB1-208ENST00000577926 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 DDX11L8A8MPP1 907 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 TLL1O43897 1013 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 VTNP04004 478 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 CA3P07451 260 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 OR52Z1P0C646 297 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 U2AF2P26368 475 aaKnown RBP eCLIP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 TMOD1P28289 359 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 CD52P31358 61 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 CYP4A11Q02928 519 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 PAK2Q13177 524 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 ORC2Q13416 577 aaPredicted RBP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 NBR1Q14596 966 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 EPHA7Q15375 998 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 ZNF174Q15697 407 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 FAM117BQ6P1L5 589 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 LRRC71Q8N4P6 559 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 DYDC2Q96IM9 177 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 SH2D3AQ9BRG2 576 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 NIFKQ9BYG3 293 aaKnown RBP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 ZNF576Q9H609 170 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 AGO3Q9H9G7 860 aaKnown RBP11.75□□□□□ -0.53
CACNB1-208ENST00000577926 SUGCTQ9HAC7 445 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 SLC28A3Q9HAS3 691 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 AKT3Q9Y243 479 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 KDM3AQ9Y4C1 1321 aa11.75□□□□□ -0.53
CACNB1-208ENST00000577926 NLRC5Q86WI3 1866 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 POTEMA6NI47 508 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 STBD1O95210 358 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
CACNB1-208ENST00000577926 CUL4AQ13619 759 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 CTTNQ14247 550 aaKnown RBP11.74□□□□□ -0.53
CACNB1-208ENST00000577926 TARBP2Q15633 366 aaKnown RBP11.74□□□□□ -0.53
CACNB1-208ENST00000577926 KIZQ2M2Z5 673 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 ANO5Q75V66 913 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 LINC01465Q8N7H1 131 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
CACNB1-208ENST00000577926 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms