RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 FAM49AQ9H0Q0 323 aaPredicted RBP18.17■□□□□ 0.5
VAPA-204ENST00000577901 AGO3Q9H9G7 860 aaKnown RBP18.17■□□□□ 0.5
VAPA-204ENST00000577901 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
VAPA-204ENST00000577901 LIMCH1Q9UPQ0 1083 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 STK36Q9NRP7 1315 aa18.17■□□□□ 0.5
VAPA-204ENST00000577901 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 INSRRP14616 1297 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 CD52P31358 61 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 CEP55Q53EZ4 464 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 IER5Q5VY09 327 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 GALNT17Q6IS24 598 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 ADHFE1Q8IWW8 467 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 LINC01599Q8WXQ3 324 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 UIMC1Q96RL1 719 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 PCYT2Q99447 389 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 KIF2CQ99661 725 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 PLVAPQ9BX97 442 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 AZI2Q9H6S1 392 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 C5orf42Q9H799 3197 aa18.16■□□□□ 0.5
VAPA-204ENST00000577901 CSPG5O95196 566 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 MMP1P03956 469 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 DLX2Q07687 328 aaPredicted RBP18.15■□□□□ 0.5
VAPA-204ENST00000577901 CLUL1Q15846 466 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 TNPO1Q92973 898 aaKnown RBP18.15■□□□□ 0.5
VAPA-204ENST00000577901 FTHL17Q9BXU8 183 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 ALG13Q9NP73 1137 aaKnown RBP18.15■□□□□ 0.5
VAPA-204ENST00000577901 KCNH7Q9NS40 1196 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
VAPA-204ENST00000577901 SLC9A2Q9UBY0 812 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 PCDHA4Q9UN74 947 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 TRPC6Q9Y210 931 aa18.15■□□□□ 0.5
VAPA-204ENST00000577901 MRPL42Q9Y6G3 142 aaKnown RBP18.15■□□□□ 0.5
VAPA-204ENST00000577901 M0QZ92 97 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 LARGE1O95461 756 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 CTDNEP1O95476 244 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 CYP3A4P08684 503 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 TMEM62Q0P6H9 643 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 RABEP1Q15276 862 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 RTN4RL1Q86UN2 441 aaPredicted RBP18.14■□□□□ 0.49
VAPA-204ENST00000577901 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 CMTR2Q8IYT2 770 aaKnown RBP18.14■□□□□ 0.49
VAPA-204ENST00000577901 ZSCAN31Q96LW9 406 aaPredicted RBP18.14■□□□□ 0.49
VAPA-204ENST00000577901 SDF4Q9BRK5 362 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 IGFLR1Q9H665 355 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 PLAGL2Q9UPG8 496 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 PCDHA2Q9Y5H9 948 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 TRPV2Q9Y5S1 764 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 SQORQ9Y6N5 450 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 KAT6AQ92794 2004 aa18.14■□□□□ 0.49
VAPA-204ENST00000577901 MEIS1O00470 390 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 ADAMTS3O15072 1205 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 MBTPS2O43462 519 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
VAPA-204ENST00000577901 ACTR2P61160 394 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 PAK2Q13177 524 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 PLCB4Q15147 1175 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 SMAD2Q15796 467 aaKnown RBP18.13■□□□□ 0.49
VAPA-204ENST00000577901 NIPA1Q7RTP0 329 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 PLPPR4Q7Z2D5 763 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 BLIDQ8IZY5 108 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 CRIPAKQ8N1N5 446 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 CYP2W1Q8TAV3 490 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 RASGRP4Q8TDF6 673 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 TRAPPC12Q8WVT3 735 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 P2RX5Q93086 422 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 AIFM3Q96NN9 605 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 PADI3Q9ULW8 664 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 ATG2AQ2TAZ0 1938 aa18.13■□□□□ 0.49
VAPA-204ENST00000577901 LINC01565O15544 149 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 ST18O60284 1047 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 TBX10O75333 385 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 DNAJB1P25685 340 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 IRS1P35568 1242 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 STAT5BP51692 787 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 CAMK1Q14012 370 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 PAN2Q504Q3 1202 aaKnown RBP18.12■□□□□ 0.49
VAPA-204ENST00000577901 NAALADL2Q58DX5 795 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 DAGLBQ8NCG7 672 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 CRYGNQ8WXF5 182 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 POP1Q99575 1024 aaKnown RBP18.12■□□□□ 0.49
VAPA-204ENST00000577901 CELF4Q9BZC1 486 aaKnown RBP18.12■□□□□ 0.49
VAPA-204ENST00000577901 NFASCO94856 1347 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 IGSF9BQ9UPX0 1349 aa18.12■□□□□ 0.49
VAPA-204ENST00000577901 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 ARP10275 920 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 USP11P51784 963 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 ADAM15Q13444 863 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 SMAD4Q13485 552 aaKnown RBP18.11■□□□□ 0.49
VAPA-204ENST00000577901 PLA2G4DQ86XP0 818 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 NME8Q8N427 588 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
VAPA-204ENST00000577901 PPP2R3CQ969Q6 453 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 PHF20Q9BVI0 1012 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 AGO4Q9HCK5 861 aaKnown RBP18.11■□□□□ 0.49
VAPA-204ENST00000577901 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
VAPA-204ENST00000577901 CD207Q9UJ71 328 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 KCNJ14Q9UNX9 436 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 TTC3P53804 2025 aa18.11■□□□□ 0.49
VAPA-204ENST00000577901 SMIM35A0A1B0GVV1 85 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 FAM86B1E9PN63 330 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms