RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 TBX3O15119 743 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 ZNF862O60290 1169 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 DKC1O60832 514 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 C22orf31O95567 290 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 CHRNA1P02708 482 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 CXCL10P02778 98 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 VTNP04004 478 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 ATP4AP20648 1035 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 QARSP47897 775 aaKnown RBP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 DEFB103AP81534 67 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 NFX1Q12986 1120 aaKnown RBP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 PAK2Q13177 524 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 GPNMBQ14956 572 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 XKR3Q5GH77 459 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 RASIP1Q5U651 963 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 PLA2G4FQ68DD2 849 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 EFCAB12Q6NXP0 572 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 NOSTRINQ8IVI9 506 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 HERC6Q8IVU3 1022 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 TPH2Q8IWU9 490 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 LRRC71Q8N4P6 559 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 APBB2Q92870 758 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 VWCEQ96DN2 955 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 ZNF668Q96K58 619 aaPredicted RBP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 ZNF576Q9H609 170 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 TTC12Q9H892 705 aaPredicted RBP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 BMP2KQ9NSY1 1161 aaPredicted RBP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 MTMR10Q9NXD2 777 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 VAV3Q9UKW4 847 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 PCDHA12Q9UN75 941 aa10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 YBX2Q9Y2T7 364 aaKnown RBP10.37□□□□□ -0.75
CDKN2A-211ENST00000577854 EML1O00423 815 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 MAGEB2O15479 319 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 P4HBP07237 508 aaKnown RBP10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 CA3P07451 260 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 FOSL2P15408 326 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 CD52P31358 61 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 DNM2P50570 870 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 PPP2R5CQ13362 524 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 CTTNQ14247 550 aaKnown RBP10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 LPIN1Q14693 890 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 KIZQ2M2Z5 673 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TMEM266Q2M3C6 531 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TCTN1Q2MV58 587 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 PLEKHG4Q58EX7 1191 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 FAM26DQ5JW98 314 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 NME8Q8N427 588 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 PHOSPHO2Q8TCD6 241 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 NLRP7Q8WX94 980 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 MYLIPQ8WY64 445 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 HAS1Q92839 578 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 DYDC2Q96IM9 177 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 CEP170P1Q96L14 293 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 YME1L1Q96TA2 773 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 LXNQ9BS40 222 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 CELF4Q9BZC1 486 aaKnown RBP10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TTYH1Q9H313 450 aaPredicted RBP10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 CERS4Q9HA82 394 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 MTUS1Q9ULD2 1270 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 PCDHA11Q9Y5I1 949 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TANC1Q9C0D5 1861 aa10.36□□□□□ -0.75
CDKN2A-211ENST00000577854 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 DENND3A2RUS2 1198 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 VPS37CA5D8V6 355 aaPredicted RBP10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 WNT7AO00755 349 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 OR52Z1P0C646 297 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 IGFBP4P22692 258 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 POLGP54098 1239 aaPredicted RBP10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 MGAT3Q09327 533 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 NBR1Q14596 966 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 EPHA7Q15375 998 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 FBXO47Q5MNV8 452 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 LARP1BQ659C4 914 aaKnown RBP10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 OTUD6AQ7L8S5 288 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 RPAINQ86UA6 219 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 KIAA0319LQ8IZA0 1049 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 MICALL1Q8N3F8 863 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 GAS2L1Q99501 681 aaPredicted RBP10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 CDX2Q99626 313 aaPredicted RBP10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 OSMRQ99650 979 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 PRDM12Q9H4Q4 367 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 ZSWIM4Q9H7M6 989 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
CDKN2A-211ENST00000577854 SCN5AQ14524 2016 aa10.34□□□□□ -0.75
CDKN2A-211ENST00000577854 POTEMA6NI47 508 aa10.34□□□□□ -0.75
CDKN2A-211ENST00000577854 ZBTB42B2RXF5 422 aa10.34□□□□□ -0.75
CDKN2A-211ENST00000577854 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
CDKN2A-211ENST00000577854 YWHABP31946 246 aaKnown RBP10.34□□□□□ -0.75
CDKN2A-211ENST00000577854 TECP42680 631 aa10.34□□□□□ -0.75
CDKN2A-211ENST00000577854 NPEPPSP55786 919 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms