RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 KRT85P78386 507 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 TARBP2Q15633 366 aaKnown RBP13.84□□□□□ -0.19
RARA-208ENST00000577646 HYIQ5T013 277 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 MARCH8Q5T0T0 291 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 CATSPER3Q86XQ3 398 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
RARA-208ENST00000577646 BANK1Q8NDB2 785 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 GDF15Q99988 308 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 TRMT13Q9NUP7 481 aaKnown RBP13.84□□□□□ -0.19
RARA-208ENST00000577646 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 KLRC1P26715 233 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 TXLNAP40222 546 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 CCT6AP40227 531 aaKnown RBP13.83□□□□□ -0.2
RARA-208ENST00000577646 PKP1Q13835 747 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 IL17AQ16552 155 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 UGCGQ16739 394 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 MFSD5Q6N075 450 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 MTHFD1LQ6UB35 978 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 ANO5Q75V66 913 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 TMEM199Q8N511 208 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 CALML4Q96GE6 196 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 IPO9Q96P70 1041 aaKnown RBP13.83□□□□□ -0.2
RARA-208ENST00000577646 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
RARA-208ENST00000577646 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 HIPK3Q9H422 1215 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 PRDM5Q9NQX1 630 aaPredicted RBP13.83□□□□□ -0.2
RARA-208ENST00000577646 CYP26B1Q9NR63 512 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.2
RARA-208ENST00000577646 DNM3Q9UQ16 869 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 SQORQ9Y6N5 450 aa13.83□□□□□ -0.2
RARA-208ENST00000577646 KAT6AQ92794 2004 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 ZBTB42B2RXF5 422 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 TREHO43280 583 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 CUTAO60888 179 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 MAFO75444 373 aaPredicted RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 PFKMP08237 780 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 CYP2C9P11712 490 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 SELPP16109 830 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 MDM2Q00987 491 aaPredicted RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 CYP4A11Q02928 519 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 TBC1D8BQ0IIM8 1120 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 CTTNQ14247 550 aaKnown RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 FAM26DQ5JW98 314 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 IER5Q5VY09 327 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 RPUSD2Q8IZ73 545 aaKnown RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 SNX29Q8TEQ0 813 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 SLC7A3Q8WY07 619 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 CCDC43Q96MW1 224 aaKnown RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 CTAGE1Q96RT6 745 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 TFIP11Q9UBB9 837 aaKnown RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
RARA-208ENST00000577646 SEPT9Q9UHD8 586 aaPredicted RBP13.82□□□□□ -0.2
RARA-208ENST00000577646 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 TRIM43BA6NCK2 446 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 MED24O75448 989 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 DGAT1O75907 488 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 C22orf31O95567 290 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
RARA-208ENST00000577646 TRIM71Q2Q1W2 868 aaKnown RBP13.81□□□□□ -0.2
RARA-208ENST00000577646 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 USP38Q8NB14 1042 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 TCP11Q8WWU5 503 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 TRIM43Q96BQ3 446 aaPredicted RBP13.81□□□□□ -0.2
RARA-208ENST00000577646 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 CEP170P1Q96L14 293 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 PYM1Q9BRP8 204 aaKnown RBP13.81□□□□□ -0.2
RARA-208ENST00000577646 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
RARA-208ENST00000577646 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
RARA-208ENST00000577646 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 M0QZ92 97 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 ASAP2O43150 1006 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 EYA4O95677 639 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 CKBP12277 381 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
RARA-208ENST00000577646 IGBP1P78318 339 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
RARA-208ENST00000577646 PPIGQ13427 754 aaKnown RBP eCLIP13.8□□□□□ -0.2
RARA-208ENST00000577646 HIC1Q14526 733 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 ODR4Q5SWX8 454 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 FOXD4L5Q5VV16 416 aaPredicted RBP13.8□□□□□ -0.2
RARA-208ENST00000577646 CABP7Q86V35 215 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 TDHQ8IZJ6 230 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 FOXD4L4Q8WXT5 416 aaPredicted RBP13.8□□□□□ -0.2
RARA-208ENST00000577646 CEP89Q96ST8 783 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 MAP7D2Q96T17 732 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 MMTAG2Q9BU76 263 aaKnown RBP13.8□□□□□ -0.2
RARA-208ENST00000577646 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 KCND2Q9NZV8 630 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 WRAP73Q9P2S5 460 aaPredicted RBP13.8□□□□□ -0.2
RARA-208ENST00000577646 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
RARA-208ENST00000577646 RSPH10B2B2RC85 870 aa13.79□□□□□ -0.2
RARA-208ENST00000577646 IQCF3P0C7M6 154 aa13.79□□□□□ -0.2
RARA-208ENST00000577646 RSPH10BP0C881 870 aa13.79□□□□□ -0.2
RARA-208ENST00000577646 THPOP40225 353 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms