RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 JAKMIP3Q5VZ66 844 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 CAPN12Q6ZSI9 719 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 VN1R5Q7Z5H4 357 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 CATIPQ7Z7H3 387 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 REXO1L1PQ8IX06 675 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 FANCBQ8NB91 859 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 ANKRD20A12PQ8NF67 263 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 FERMT2Q96AC1 680 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 FAM84AQ96KN4 292 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 CTAGE1Q96RT6 745 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 ZKSCAN3Q9BRR0 538 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 CARD6Q9BX69 1037 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 NAA15Q9BXJ9 866 aaKnown RBP6.41□□□□□ -1.38
CTNS-210ENST00000576979 HSD3B7Q9H2F3 369 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 CCDC87Q9NVE4 849 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 LMCD1Q9NZU5 365 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 SALL4Q9UJQ4 1053 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 PCDHB6Q9Y5E3 794 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 ACTL7BQ9Y614 415 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 ROBO1Q9Y6N7 1651 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 TNKSO95271 1327 aa6.41□□□□□ -1.38
CTNS-210ENST00000576979 BAZ2BQ9UIF8 2168 aaKnown RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 VWA3AA6NCI4 1184 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 LRRC10BA6NIK2 292 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 ZBTB39O15060 712 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 FOXN1O15353 648 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 DYNC1LI2O43237 492 aaPredicted RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 PRPF3O43395 683 aaKnown RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 TADA3O75528 432 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 DDAH1O94760 285 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 CCDC175P0C221 793 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 ZNF18P17022 549 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 GUCY1A2P33402 732 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 SARSP49591 514 aaKnown RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 TOB1P50616 345 aaPredicted RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 PPP2R3AQ06190 1150 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 SPAG1Q07617 926 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 GOLGA8FQ08AF8 430 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 GOLGA8DPQ0D2H9 430 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 TUBB2AQ13885 445 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 EXOSC6Q5RKV6 272 aaKnown RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 IFIT1BQ5T764 474 aaKnown RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 SPATA1Q5VX52 437 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 SUSD4Q5VX71 490 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 C16orf46Q6P387 395 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 TRIM65Q6PJ69 517 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 DPH6Q7L8W6 267 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 IQCA1Q86XH1 822 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 TMEM139Q8IV31 216 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 CCDC12Q8WUD4 166 aaPredicted RBP6.4□□□□□ -1.38
CTNS-210ENST00000576979 GOLGA1Q92805 767 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 DHX58Q96C10 678 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 CCDC51Q96ER9 411 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 PANX2Q96RD6 677 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 TUBB2BQ9BVA1 445 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 TANGO6Q9C0B7 1094 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 CSRNP2Q9H175 543 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 SEMA6CQ9H3T2 930 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 CABP5Q9NP86 173 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 INCENPQ9NQS7 918 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 BTG4Q9NY30 223 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 FAM53CQ9NYF3 392 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 ANAPC4Q9UJX5 808 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 ZNF652Q9Y2D9 606 aa6.4□□□□□ -1.38
CTNS-210ENST00000576979 SLIT2O94813 1529 aa6.4□□□□□ -1.39
CTNS-210ENST00000576979 COL16A1Q07092 1604 aaPredicted RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 NRAPQ86VF7 1730 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 CDK5RAP2Q96SN8 1893 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 KIF5CO60282 957 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 SLFN14P0C7P3 912 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 PNMA6AP0CW24 399 aaPredicted RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 ADH5P11766 374 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 AFMP43652 599 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ADKP55263 362 aaKnown RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 TUBB4BP68371 445 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ARHGAP4P98171 946 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 GRIN1Q05586 938 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 FMR1Q06787 632 aaKnown RBP eCLIP6.39□□□□□ -1.39
CTNS-210ENST00000576979 CHRNDQ07001 517 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 TRIM14Q14142 442 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 IKBKEQ14164 716 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 NR1I3Q14994 352 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 TERF2Q15554 542 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ECM1Q16610 540 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 ZNF827Q17R98 1081 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 HSP90AA4PQ58FG1 418 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 CAVIN4Q5BKX8 364 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 TTC38Q5R3I4 469 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 KLHL10Q6JEL2 608 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 TMED8Q6PL24 325 aaPredicted RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 CNGA4Q8IV77 575 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 FOXP4Q8IVH2 680 aaPredicted RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 LRRC56Q8IYG6 542 aaPredicted RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 CEP112Q8N8E3 955 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 IGSF22Q8N9C0 903 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 TC2NQ8N9U0 490 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 MIGA1Q8NAN2 632 aa6.39□□□□□ -1.39
CTNS-210ENST00000576979 CTCFLQ8NI51 663 aaPredicted RBP6.39□□□□□ -1.39
CTNS-210ENST00000576979 TOX2Q96NM4 488 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms