RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.21
PRPF8-215ENST00000576958 POF1BQ8WVV4 589 aa13.71□□□□□ -0.21
PRPF8-215ENST00000576958 PHKBQ93100 1093 aa13.71□□□□□ -0.21
PRPF8-215ENST00000576958 OSMRQ99650 979 aa13.71□□□□□ -0.21
PRPF8-215ENST00000576958 HCN4Q9Y3Q4 1203 aa13.71□□□□□ -0.21
PRPF8-215ENST00000576958 SMIM35A0A1B0GVV1 85 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 DCXO43602 365 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 C22orf31O95567 290 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 RB1P06400 928 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 ERVFC1P60507 584 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 SMAD2Q15796 467 aaKnown RBP13.7□□□□□ -0.22
PRPF8-215ENST00000576958 IER5Q5VY09 327 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 HFE2Q6ZVN8 426 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 FAM228AQ86W67 206 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 ADHFE1Q8IWW8 467 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
PRPF8-215ENST00000576958 FEZF2Q8TBJ5 459 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 ADAM2Q99965 735 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 RBM28Q9NW13 759 aaKnown RBP13.7□□□□□ -0.22
PRPF8-215ENST00000576958 TECTAO75443 2155 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 WDR81Q562E7 1941 aa13.7□□□□□ -0.22
PRPF8-215ENST00000576958 TMEM150BA6NC51 233 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 TBKBP1A7MCY6 615 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 PRR33A8MZF0 331 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 MAFGO15525 162 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 FGFR4P22455 802 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 ZNF76P36508 570 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 CLCN3P51790 818 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 UGCGQ16739 394 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 PFKFB3Q16875 520 aaPredicted RBP13.69□□□□□ -0.22
PRPF8-215ENST00000576958 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 PPP1R18Q6NYC8 613 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 SYNE3Q6ZMZ3 975 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 Q6ZUG5 572 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 LRRC71Q8N4P6 559 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 ATP8B4Q8TF62 1192 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 BRF1Q92994 677 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 LENG9Q96B70 501 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
PRPF8-215ENST00000576958 APOL5Q9BWW9 433 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
PRPF8-215ENST00000576958 ZNF302Q9NR11 478 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 RNF19AQ9NV58 838 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 ST3GAL5Q9UNP4 418 aa13.69□□□□□ -0.22
PRPF8-215ENST00000576958 KDM3AQ9Y4C1 1321 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 ZNF318Q5VUA4 2279 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 M0QZ92 97 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
PRPF8-215ENST00000576958 GPR32O75388 356 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
PRPF8-215ENST00000576958 SARSP49591 514 aaKnown RBP13.68□□□□□ -0.22
PRPF8-215ENST00000576958 NDUFV1P49821 464 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 ALYREFQ86V81 257 aaKnown RBP13.68□□□□□ -0.22
PRPF8-215ENST00000576958 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 JAKMIP1Q96N16 626 aaKnown RBP13.68□□□□□ -0.22
PRPF8-215ENST00000576958 PHOX2BQ99453 314 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 SH2D3AQ9BRG2 576 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 LMAN2LQ9H0V9 348 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 TYW1Q9NV66 732 aaKnown RBP13.68□□□□□ -0.22
PRPF8-215ENST00000576958 CD207Q9UJ71 328 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 SNX14Q9Y5W7 946 aa13.68□□□□□ -0.22
PRPF8-215ENST00000576958 C9IYK1 514 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 ZNF862O60290 1169 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 METAP2P50579 478 aaKnown RBP eCLIP13.67□□□□□ -0.225e-7■□□□□ 8.2
PRPF8-215ENST00000576958 AP3B2Q13367 1082 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 DRP2Q13474 957 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 SMAD4Q13485 552 aaKnown RBP13.67□□□□□ -0.22
PRPF8-215ENST00000576958 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
PRPF8-215ENST00000576958 PRR16Q569H4 304 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 METTL13Q8N6R0 699 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 CWH43Q9H720 699 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 LRFN2Q9ULH4 789 aa13.67□□□□□ -0.22
PRPF8-215ENST00000576958 MYH9P35579 1960 aaKnown RBP13.66□□□□□ -0.22
PRPF8-215ENST00000576958 CHMP2AO43633 222 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 HBP1O60381 514 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 FOSP01100 380 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-215ENST00000576958 CYP3A4P08684 503 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-215ENST00000576958 DSC3Q14574 896 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 NTRK3Q16288 839 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 TSGA10IPQ3SY00 556 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 SPOUT1Q5T280 376 aaKnown RBP13.66□□□□□ -0.22
PRPF8-215ENST00000576958 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 CKAP2LQ8IYA6 745 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 COLGALT1Q8NBJ5 622 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 P2RX5Q93086 422 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 FBXL18Q96ME1 805 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 FTHL17Q9BXU8 183 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
PRPF8-215ENST00000576958 USP15Q9Y4E8 981 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms