RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SLC24A5Q71RS6 500 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 NME8Q8N427 588 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 TNPO1Q92973 898 aaKnown RBP18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 PCYT2Q99447 389 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 ATP6V0A4Q9HBG4 840 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 RGS18Q9NS28 235 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 DIAPH3Q9NSV4 1193 aa18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 NOC2LQ9Y3T9 749 aaKnown RBP18.68■□□□□ 0.58
CTDNEP1-211ENST00000575783 KIAA1671Q9BY89 1806 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 MED19A0JLT2 244 aaPredicted RBP18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 MEIS2O14770 477 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 PI15O43692 258 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 PBX3P40426 434 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 KRT17Q04695 432 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 ITIH3Q06033 890 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 MTMR1Q13613 665 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 PLCB4Q15147 1175 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 DSCC1Q9BVC3 393 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 CDHR5Q9HBB8 845 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 SENP2Q9HC62 589 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 ERVK-5Q9HDB9 667 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 C1orf112Q9NSG2 853 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 ST3GAL5Q9UNP4 418 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 HCFC2Q9Y5Z7 792 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 ZNF292O60281 2723 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 DOCK5Q9H7D0 1870 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 PLXNA4Q9HCM2 1894 aa18.67■□□□□ 0.58
CTDNEP1-211ENST00000575783 SMIM35A0A1B0GVV1 85 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 C9IYK1 514 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 IFIT3O14879 490 aaKnown RBP18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 PDE4AP27815 886 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 CA8P35219 290 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 MTHFD1LQ6UB35 978 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 TDRD5Q8NAT2 981 aaKnown RBP18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 KDM3AQ9Y4C1 1321 aa18.66■□□□□ 0.58
CTDNEP1-211ENST00000575783 PIK3CDO00329 1044 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 ARP10275 920 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 MTHFRP42898 656 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 ANGPT1Q15389 498 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 RARS2Q5T160 578 aaKnown RBP18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 KANK3Q6NY19 840 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 DGLUCYQ7Z3D6 616 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 C12orf76Q8N812 135 aaPredicted RBP18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 LNPKQ9C0E8 428 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 JPH1Q9HDC5 661 aaPredicted RBP18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 DBR1Q9UK59 544 aaKnown RBP18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 KAT6AQ92794 2004 aa18.65■□□□□ 0.58
CTDNEP1-211ENST00000575783 ERICH2A1L162 156 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 GPR182O15218 404 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 KLRC1P26715 233 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 STAT5BP51692 787 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 TROAPQ12815 778 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 TRDNQ13061 729 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 CWF19L1Q69YN2 538 aaKnown RBP18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 LRRC55Q6ZSA7 311 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 ZDHHC14Q8IZN3 488 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 MRPL43Q8N983 215 aaKnown RBP18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 TMEM40Q8WWA1 233 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 RRP36Q96EU6 259 aaKnown RBP18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 ZNF558Q96NG5 402 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 PPP1R16BQ96T49 567 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 TMEM161AQ9NX61 479 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 SLC9A2Q9UBY0 812 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 UBIAD1Q9Y5Z9 338 aa18.64■□□□□ 0.57
CTDNEP1-211ENST00000575783 CLASP2O75122 1294 aaKnown RBP18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 AOC1P19801 751 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 SMC1AQ14683 1233 aaKnown RBP18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 ATAT1Q5SQI0 421 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 ODR4Q5SWX8 454 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 CCDC105Q8IYK2 499 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 KIAA2013Q8IYS2 634 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 PLCD3Q8N3E9 789 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 TMEM117Q9H0C3 514 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 PSTPIP2Q9H939 334 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 JADE2Q9NQC1 790 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 SPG21Q9NZD8 308 aa18.63■□□□□ 0.57
CTDNEP1-211ENST00000575783 C2orf71A6NGG8 1288 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 NPR3P17342 541 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 PPM1AP35813 382 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 ACTR2P61160 394 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 FAM189BP81408 668 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 WTAPQ15007 396 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 PLPPR4Q7Z2D5 763 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 CATIPQ7Z7H3 387 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 KIAA0319LQ8IZA0 1049 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 DTWD2Q8NBA8 298 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 CASD1Q96PB1 797 aa18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 EP300Q09472 2414 aaPredicted RBP18.62■□□□□ 0.57
CTDNEP1-211ENST00000575783 BAZ2BQ9UIF8 2168 aaKnown RBP18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 STK25O00506 426 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 MAFGO15525 162 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 CXCL14O95715 111 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 LMNAP02545 664 aaKnown RBP18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 UBE2SQ16763 222 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 KIZQ2M2Z5 673 aa18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 FAM43BQ6ZT52 329 aaPredicted RBP18.61■□□□□ 0.57
CTDNEP1-211ENST00000575783 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms