RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 KIF28PB7ZC32 967 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 H3BQV1 296 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 WNT7AO00755 349 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 MCM7P33993 719 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 KCNJ6P48051 423 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 WDR5P61964 334 aaKnown RBP15.24■□□□□ 0.03
CIITA-210ENST00000575513 CDC42EP1Q00587 391 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
CIITA-210ENST00000575513 FBXO47Q5MNV8 452 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 TTC38Q5R3I4 469 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
CIITA-210ENST00000575513 DEFB123Q8N688 67 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 LINC01465Q8N7H1 131 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 NEK9Q8TD19 979 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 HSD17B14Q9BPX1 270 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 PBX4Q9BYU1 374 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
CIITA-210ENST00000575513 ZSWIM4Q9H7M6 989 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 PCDHA11Q9Y5I1 949 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 TRPV2Q9Y5S1 764 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 CDY2AQ9Y6F7 541 aa15.24■□□□□ 0.03
CIITA-210ENST00000575513 LAD1O00515 517 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 SLITRK3O94933 977 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 LYPLA2O95372 231 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 ATP2B1P20020 1258 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 PDCP20941 246 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 DNAJB2P25686 324 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 TXKP42681 527 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 TBC1D8BQ0IIM8 1120 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 LPIN1Q14693 890 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 RILPL1Q5EBL4 403 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 TSHZ1Q6ZSZ6 1077 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 ANO5Q75V66 913 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 METTL13Q8N6R0 699 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 BANK1Q8NDB2 785 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 TIFAQ96CG3 184 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 ZBTB10Q96DT7 871 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 CEP89Q96ST8 783 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 JPH2Q9BR39 696 aaPredicted RBP15.23■□□□□ 0.03
CIITA-210ENST00000575513 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
CIITA-210ENST00000575513 TMEM60Q9H2L4 133 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
CIITA-210ENST00000575513 TET1Q8NFU7 2136 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 IGKV6-21A0A0C4DH24 114 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 DDX11L8A8MPP1 907 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 GRXCR1A8MXD5 290 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
CIITA-210ENST00000575513 XRCC6P12956 609 aaKnown RBP eCLIP15.22■□□□□ 0.03
CIITA-210ENST00000575513 TOB1P50616 345 aaPredicted RBP15.22■□□□□ 0.03
CIITA-210ENST00000575513 ZNF174Q15697 407 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 TCTN1Q2MV58 587 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 ODR4Q5SWX8 454 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 MCTP1Q6DN14 999 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 NCAPH2Q6IBW4 605 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 EFCAB12Q6NXP0 572 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
CIITA-210ENST00000575513 HERC6Q8IVU3 1022 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 MAP7D2Q96T17 732 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 EIF2AK1Q9BQI3 630 aaKnown RBP15.22■□□□□ 0.03
CIITA-210ENST00000575513 LXNQ9BS40 222 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 FTHL17Q9BXU8 183 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 MTMR10Q9NXD2 777 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 SCN5AQ14524 2016 aa15.22■□□□□ 0.03
CIITA-210ENST00000575513 MAFO75444 373 aaPredicted RBP15.21■□□□□ 0.03
CIITA-210ENST00000575513 AMHP03971 560 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 OR52Z1P0C646 297 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 GHRP10912 638 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 DNM2P50570 870 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 CRYBB1P53674 252 aaPredicted RBP15.21■□□□□ 0.03
CIITA-210ENST00000575513 PDIA5Q14554 519 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 RGL1Q9NZL6 768 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 SEPT9Q9UHD8 586 aaPredicted RBP15.21■□□□□ 0.03
CIITA-210ENST00000575513 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
CIITA-210ENST00000575513 MYH9P35579 1960 aaKnown RBP15.21■□□□□ 0.03
CIITA-210ENST00000575513 GPR32O75388 356 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 GJB5O95377 273 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 MUTP22033 750 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 YWHABP31946 246 aaKnown RBP15.2■□□□□ 0.02
CIITA-210ENST00000575513 PBX2P40425 430 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
CIITA-210ENST00000575513 MTERF2Q49AM1 385 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 BRAPQ7Z569 592 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 TPH2Q8IWU9 490 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 POLR3CQ9BUI4 534 aaPredicted RBP15.2■□□□□ 0.02
CIITA-210ENST00000575513 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
CIITA-210ENST00000575513 ZNF576Q9H609 170 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 ANKEF1Q9NU02 776 aa15.2■□□□□ 0.02
CIITA-210ENST00000575513 WRAP73Q9P2S5 460 aaPredicted RBP15.2■□□□□ 0.02
CIITA-210ENST00000575513 GPR182O15218 404 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 GAS2O43903 313 aaKnown RBP15.19■□□□□ 0.02
CIITA-210ENST00000575513 RFC5P40937 340 aa15.19■□□□□ 0.02
CIITA-210ENST00000575513 PRPHP41219 470 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms