RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 GAS2O43903 313 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 C22orf31O95567 290 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 YEATS4O95619 227 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 BRD1O95696 1058 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 RSPH10BP0C881 870 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CYP2C18P33260 490 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 LONP1P36776 959 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 THPOP40225 353 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CCT6AP40227 531 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 NASPP49321 788 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 DNM2P50570 870 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 MDM2Q00987 491 aaPredicted RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CYP4A11Q02928 519 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CTTNQ14247 550 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 SLC39A14Q15043 492 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 PTPAQ15257 358 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 TRIM71Q2Q1W2 868 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 MTERF2Q49AM1 385 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 TRMT1LQ7Z2T5 733 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CATSPER3Q86XQ3 398 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 USP38Q8NB14 1042 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 SLC7A3Q8WY07 619 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 DHX38Q92620 1227 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CEP170P1Q96L14 293 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CCDC43Q96MW1 224 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 USP28Q96RU2 1077 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 MAP7D2Q96T17 732 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 UBE2OQ9C0C9 1292 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 NT5C3AQ9H0P0 336 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 MTIF3Q9H2K0 278 aaKnown RBP10.69□□□□□ -0.7
CCDC40-214ENST00000575431 IL23AQ9NPF7 189 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 CYP26B1Q9NR63 512 aa10.69□□□□□ -0.7
CCDC40-214ENST00000575431 TRIP12Q14669 1992 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-214ENST00000575431 MYH15Q9Y2K3 1946 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 PPP6R2O75170 966 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 MAFO75444 373 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-214ENST00000575431 SPATA31C1P0DKV0 1188 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 ACTN1P12814 892 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 CSF2RAP15509 400 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 ITGB8P26012 769 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 UBA7P41226 1012 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 CCL23P55773 120 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 MRPS6P82932 125 aaKnown RBP10.68□□□□□ -0.7
CCDC40-214ENST00000575431 STK38Q15208 465 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 IL17AQ16552 155 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 XKR9Q5GH70 373 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 ODR4Q5SWX8 454 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 ZNF618Q5T7W0 954 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 EFCAB12Q6NXP0 572 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 FAM173BQ6P4H8 233 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 PSRC1Q6PGN9 363 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-214ENST00000575431 METTL13Q8N6R0 699 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 SNX29Q8TEQ0 813 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 DNAJB3Q8WWF6 145 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 TCP11Q8WWU5 503 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 WNT8AQ9H1J5 351 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 DBR1Q9UK59 544 aaKnown RBP10.68□□□□□ -0.7
CCDC40-214ENST00000575431 SRPRBQ9Y5M8 271 aaKnown RBP10.68□□□□□ -0.7
CCDC40-214ENST00000575431 CLIC4Q9Y696 253 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 TANC1Q9C0D5 1861 aa10.68□□□□□ -0.7
CCDC40-214ENST00000575431 UMODL1Q5DID0 1318 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 LOXHD1Q8IVV2 1947 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 IGKV6-21A0A0C4DH24 114 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 MED24O75448 989 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 DGAT1O75907 488 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 FGBP02675 491 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 TXLNAP40222 546 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 POLGP54098 1239 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-214ENST00000575431 PKP1Q13835 747 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 KIAA0319LQ8IZA0 1049 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 KRI1Q8N9T8 703 aaKnown RBP10.67□□□□□ -0.7
CCDC40-214ENST00000575431 LINC00301Q8NCQ3 95 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 WNT8BQ93098 351 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 CALML4Q96GE6 196 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 CDK5RAP3Q96JB5 506 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 CEP89Q96ST8 783 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 CELF4Q9BZC1 486 aaKnown RBP10.67□□□□□ -0.7
CCDC40-214ENST00000575431 FAM49AQ9H0Q0 323 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-214ENST00000575431 DHX33Q9H6R0 707 aaKnown RBP10.67□□□□□ -0.7
CCDC40-214ENST00000575431 SUGCTQ9HAC7 445 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 WRAP73Q9P2S5 460 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-214ENST00000575431 DNM3Q9UQ16 869 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 TRPV2Q9Y5S1 764 aa10.67□□□□□ -0.7
CCDC40-214ENST00000575431 SPTLC2O15270 562 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 ASAP2O43150 1006 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 EFCAB14O75071 495 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 BAIAP3O94812 1187 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 CXCL10P02778 98 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 RARRES1P49788 294 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 NPEPPSP55786 919 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 KRT85P78386 507 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 CEBPZQ03701 1054 aaKnown RBP10.66□□□□□ -0.7
CCDC40-214ENST00000575431 HYIQ5T013 277 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-214ENST00000575431 PLA2G4FQ68DD2 849 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 TRAF7Q6Q0C0 670 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 RUFY4Q6ZNE9 571 aa10.66□□□□□ -0.7
CCDC40-214ENST00000575431 CABP7Q86V35 215 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms