RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RPAINQ86UA6 219 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 EXOC8Q8IYI6 725 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 METTL13Q8N6R0 699 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 MTIF3Q9H2K0 278 aaKnown RBP17.03■□□□□ 0.32
LITAF-217ENST00000575426 PRO3102Q9H379 93 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 TET1Q8NFU7 2136 aa17.03■□□□□ 0.32
LITAF-217ENST00000575426 SLITRK3O94933 977 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 CTSHP09668 335 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 ATP2C1P98194 919 aaPredicted RBP17.02■□□□□ 0.32
LITAF-217ENST00000575426 SHHQ15465 462 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 HAUS3Q68CZ6 603 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 EFCAB12Q6NXP0 572 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 ZNF365Q70YC5 407 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 ZBTB10Q96DT7 871 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 CCDC43Q96MW1 224 aaKnown RBP17.02■□□□□ 0.32
LITAF-217ENST00000575426 HSD17B14Q9BPX1 270 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 JPH2Q9BR39 696 aaPredicted RBP17.02■□□□□ 0.32
LITAF-217ENST00000575426 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.32
LITAF-217ENST00000575426 SUGCTQ9HAC7 445 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 TUFT1Q9NNX1 390 aa17.02■□□□□ 0.32
LITAF-217ENST00000575426 ZBTB42B2RXF5 422 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 C22orf31O95567 290 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
LITAF-217ENST00000575426 DNM2P50570 870 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 EPHB4P54760 987 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 SF3A1Q15459 793 aaKnown RBP17.01■□□□□ 0.31
LITAF-217ENST00000575426 XKR9Q5GH70 373 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 FAM26DQ5JW98 314 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 TMEM240Q5SV17 173 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 ARL6IP4Q66PJ3 421 aaKnown RBP17.01■□□□□ 0.31
LITAF-217ENST00000575426 CEP170P1Q96L14 293 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
LITAF-217ENST00000575426 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
LITAF-217ENST00000575426 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
LITAF-217ENST00000575426 SIP14410 1827 aa17■□□□□ 0.31
LITAF-217ENST00000575426 STBD1O95210 358 aa17■□□□□ 0.31
LITAF-217ENST00000575426 LYPLA2O95372 231 aa17■□□□□ 0.31
LITAF-217ENST00000575426 RPA1P27694 616 aa17■□□□□ 0.31
LITAF-217ENST00000575426 CCT6AP40227 531 aaKnown RBP17■□□□□ 0.31
LITAF-217ENST00000575426 MRPS6P82932 125 aaKnown RBP17■□□□□ 0.31
LITAF-217ENST00000575426 TARBP2Q15633 366 aaKnown RBP17■□□□□ 0.31
LITAF-217ENST00000575426 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
LITAF-217ENST00000575426 C9orf50Q5SZB4 431 aa17■□□□□ 0.31
LITAF-217ENST00000575426 FOXD4L5Q5VV16 416 aaPredicted RBP17■□□□□ 0.31
LITAF-217ENST00000575426 KRT79Q5XKE5 535 aa17■□□□□ 0.31
LITAF-217ENST00000575426 PLA2G4FQ68DD2 849 aa17■□□□□ 0.31
LITAF-217ENST00000575426 ANO5Q75V66 913 aa17■□□□□ 0.31
LITAF-217ENST00000575426 C16orf59Q7L2K0 433 aa17■□□□□ 0.31
LITAF-217ENST00000575426 FOXD4L4Q8WXT5 416 aaPredicted RBP17■□□□□ 0.31
LITAF-217ENST00000575426 SH2D3AQ9BRG2 576 aa17■□□□□ 0.31
LITAF-217ENST00000575426 ANKEF1Q9NU02 776 aa17■□□□□ 0.31
LITAF-217ENST00000575426 AKT3Q9Y243 479 aa17■□□□□ 0.31
LITAF-217ENST00000575426 TRPV2Q9Y5S1 764 aa17■□□□□ 0.31
LITAF-217ENST00000575426 CDY2AQ9Y6F7 541 aa17■□□□□ 0.31
LITAF-217ENST00000575426 TMEM150BA6NC51 233 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 VWA3AA6NCI4 1184 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 ZBBXA8MT70 800 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 NBNO60934 754 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 CHRNA1P02708 482 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
LITAF-217ENST00000575426 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
LITAF-217ENST00000575426 MUTP22033 750 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 POLGP54098 1239 aaPredicted RBP16.99■□□□□ 0.31
LITAF-217ENST00000575426 NPEPPSP55786 919 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 TMEM62Q0P6H9 643 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 CNKSR3Q6P9H4 555 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 TRAF7Q6Q0C0 670 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 OTOP2Q7RTS6 562 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 CATSPER3Q86XQ3 398 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 KIAA0319LQ8IZA0 1049 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 ZNF710Q8N1W2 664 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 IGSF22Q8N9C0 903 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 SLC7A3Q8WY07 619 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
LITAF-217ENST00000575426 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
LITAF-217ENST00000575426 CELF4Q9BZC1 486 aaKnown RBP16.99■□□□□ 0.31
LITAF-217ENST00000575426 WRAP73Q9P2S5 460 aaPredicted RBP16.99■□□□□ 0.31
LITAF-217ENST00000575426 MAFO75444 373 aaPredicted RBP16.98■□□□□ 0.31
LITAF-217ENST00000575426 MED24O75448 989 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 CXCL10P02778 98 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 RFC5P40937 340 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 CLCN3P51790 818 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
LITAF-217ENST00000575426 FAM173BQ6P4H8 233 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 LRRC71Q8N4P6 559 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 SNX29Q8TEQ0 813 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 HERVK_113Q902F9 699 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 SEPT8Q92599 483 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
LITAF-217ENST00000575426 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 CLIC4Q9Y696 253 aa16.98■□□□□ 0.31
LITAF-217ENST00000575426 TRIOBPQ9H2D6 2365 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 F13A1P00488 732 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 CDC42EP1Q00587 391 aa16.97■□□□□ 0.31
LITAF-217ENST00000575426 MGAT3Q09327 533 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms