RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 PYGMP11217 842 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 KRT4P19013 534 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 SERPINB3P29508 390 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 HPDP32754 393 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 LIFRP42702 1097 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PLS1Q14651 629 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 DDB1Q16531 1140 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 OLFML2BQ68BL8 750 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PHLDB3Q6NSJ2 640 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 C8orf74Q6P047 294 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PATL1Q86TB9 770 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 NECAB1Q8N987 351 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 SPERTQ8NA61 448 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PIP4K2CQ8TBX8 421 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PRCCQ92733 491 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 SNF8Q96H20 258 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 LRCH3Q96II8 777 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ANKRD36BP1Q96IX9 119 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF317Q96PQ6 595 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 RSPH9Q9H1X1 276 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 GBA3Q9H227 469 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 GGNBP2Q9H3C7 697 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ETNK2Q9NVF9 386 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 COMMD8Q9NX08 183 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 IL20Q9NYY1 176 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 HBS1LQ9Y450 684 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ITSN1Q15811 1721 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 MYH7P12883 1935 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 IDH3BO43837 385 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 SUN1O94901 812 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ENPP1P22413 925 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 CMA1P23946 247 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ATICP31939 592 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 NDUFA8P51970 172 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PLCB3Q01970 1234 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 HSP90AA5PQ58FG0 334 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ODF2Q5BJF6 829 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 FAM133BQ5BKY9 247 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF362Q5T0B9 420 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 CROCCP2Q86T23 111 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ZBED8Q8IZ13 594 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 WNT2BQ93097 391 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PRPF18Q99633 342 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 HAUS7Q99871 368 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 C2orf49Q9BVC5 232 aaPredicted RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 NDEL1Q9GZM8 345 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 METTL14Q9HCE5 456 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 TRPC7Q9HCX4 862 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 DDX43Q9NXZ2 648 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 HMG20BQ9P0W2 317 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PCDHA7Q9UN72 937 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 AGAP1Q9UPQ3 857 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 SNX9Q9Y5X1 595 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 PDS5AQ29RF7 1337 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 ADGRF5Q8IZF2 1346 aa8.61□□□□□ -1.03
TOM1L1-220ENST00000575333 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 A0A087WWV3 80 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 E9PBE3 544 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 ATP9AO75110 1047 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 UBOX5O94941 541 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 ATP1A1P05023 1023 aaKnown RBP8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 CCNCP24863 283 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 PBX1P40424 430 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 PAFAH1B1P43034 410 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 GCGRP47871 477 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 EIF3BP55884 814 aaKnown RBP8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 C2orf54Q08AI8 447 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 PCNX4Q63HM2 1172 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 NXNQ6DKJ4 435 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 BLOC1S2Q6QNY1 142 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 B3GNT6Q6ZMB0 384 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 Q6ZNX1 250 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 BBS5Q8N3I7 341 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 GIPC2Q8TF65 315 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 STARD8Q92502 1023 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 INPP5DQ92835 1189 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 USP28Q96RU2 1077 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 AS3MTQ9HBK9 375 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 RXFP1Q9HBX9 757 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 PLAAQ9Y263 795 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 ZNF711Q9Y462 761 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 PASKQ96RG2 1323 aa8.6□□□□□ -1.03
TOM1L1-220ENST00000575333 SIGLEC16A6NMB1 481 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 PHF20L1A8MW92 1017 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 HIP1O00291 1037 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 TEX28O15482 410 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 HNRNPCL1O60812 293 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ZBED1O96006 694 aa8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 OAS1P00973 400 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 TFRCP02786 760 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 HSPA1AP0DMV8 641 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 HSPA1BP0DMV9 641 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 TKTP29401 623 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-220ENST00000575333 ACADSBP45954 432 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms