RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 WDR5P61964 334 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 SPIRE1Q08AE8 756 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 CUL4AQ13619 759 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 EPHA7Q15375 998 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 XKR3Q5GH77 459 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 NME8Q8N427 588 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 MTMR9Q96QG7 549 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 TMEM60Q9H2L4 133 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 TTC12Q9H892 705 aaPredicted RBP23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 TRPV2Q9Y5S1 764 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 MAGEB2O15479 319 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 DKC1O60832 514 aaKnown RBP eCLIP23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 EFCAB14O75071 495 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 QARSP47897 775 aaKnown RBP23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 RABGGTBP53611 331 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 ORC2Q13416 577 aaPredicted RBP23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 RAB30Q15771 203 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 TIFAQ96CG3 184 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 FAM161BQ96MY7 647 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 IFIH1Q9BYX4 1025 aaKnown RBP23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 MSRAQ9UJ68 235 aa23.25■■□□□ 1.31
HCFC1R1-208ENST00000575214 DDX11L8A8MPP1 907 aa23.24■■□□□ 1.31
HCFC1R1-208ENST00000575214 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
HCFC1R1-208ENST00000575214 LARP1BQ659C4 914 aaKnown RBP23.24■■□□□ 1.31
HCFC1R1-208ENST00000575214 KIAA0319LQ8IZA0 1049 aa23.24■■□□□ 1.31
HCFC1R1-208ENST00000575214 PHOSPHO2Q8TCD6 241 aa23.24■■□□□ 1.31
HCFC1R1-208ENST00000575214 TMEM150BA6NC51 233 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 TMOD1P28289 359 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 CLCN3P51790 818 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 DEFB103AP81534 67 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 TBC1D8BQ0IIM8 1120 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 NBR1Q14596 966 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 LPIN1Q14693 890 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 FBXO47Q5MNV8 452 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 APBB2Q92870 758 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 DYDC2Q96IM9 177 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 LXNQ9BS40 222 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 NIFKQ9BYG3 293 aaKnown RBP23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 CELF4Q9BZC1 486 aaKnown RBP23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 RGL1Q9NZL6 768 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 GINS2Q9Y248 185 aa23.23■■□□□ 1.31
HCFC1R1-208ENST00000575214 K7ELQ4 463 aaPredicted RBP23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 STBD1O95210 358 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 OR52Z1P0C646 297 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 CYP4A11Q02928 519 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 EFCAB12Q6NXP0 572 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 TSHZ1Q6ZSZ6 1077 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 HERC6Q8IVU3 1022 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 LRRC71Q8N4P6 559 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 MAP7D2Q96T17 732 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 PPP1R16BQ96T49 567 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 EIF2AK1Q9BQI3 630 aaKnown RBP23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 SH2D3AQ9BRG2 576 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 SUGCTQ9HAC7 445 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 WRAP73Q9P2S5 460 aaPredicted RBP23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 AKT3Q9Y243 479 aa23.22■■□□□ 1.31
HCFC1R1-208ENST00000575214 TMEM265A0A087WTH1 108 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 POTEMA6NI47 508 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 VTNP04004 478 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 CTTNQ14247 550 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 TARBP2Q15633 366 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 PLA2G4FQ68DD2 849 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 ANO5Q75V66 913 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 NKX2-4Q9H2Z4 354 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 ZSWIM4Q9H7M6 989 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 YBX2Q9Y2T7 364 aaKnown RBP23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 PCDHA11Q9Y5I1 949 aa23.21■■□□□ 1.31
HCFC1R1-208ENST00000575214 WDR81Q562E7 1941 aa23.2■■□□□ 1.31
HCFC1R1-208ENST00000575214 TOB1P50616 345 aaPredicted RBP23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 TPH2Q8IWU9 490 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 C4orf19Q8IY42 314 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 MYOCDQ8IZQ8 938 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 TTYH1Q9H313 450 aaPredicted RBP23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 SEMA6BQ9H3T3 888 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 MTMR10Q9NXD2 777 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 PCDHB6Q9Y5E3 794 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 SQORQ9Y6N5 450 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 KDM3AQ9Y4C1 1321 aa23.2■■□□□ 1.3
HCFC1R1-208ENST00000575214 AMHP03971 560 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 MYOGP15173 224 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 CD52P31358 61 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 TECP42680 631 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 KIZQ2M2Z5 673 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 TMCO2Q7Z6W1 182 aaPredicted RBP23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 LINC01465Q8N7H1 131 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 USP38Q8NB14 1042 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 NEK9Q8TD19 979 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 AGO3Q9H9G7 860 aaKnown RBP23.19■■□□□ 1.3
HCFC1R1-208ENST00000575214 SLITRK3O94933 977 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 YWHABP31946 246 aaKnown RBP23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 NPEPPSP55786 919 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 PAK2Q13177 524 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 CEP170P1Q96L14 293 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 CEP89Q96ST8 783 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 ZNF576Q9H609 170 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 SLC28A3Q9HAS3 691 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 CDHR5Q9HBB8 845 aa23.18■■□□□ 1.3
HCFC1R1-208ENST00000575214 CYP26B1Q9NR63 512 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms