RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 SLC37A4O43826 429 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 CD52P31358 61 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 SFNP31947 248 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 GRB10Q13322 594 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 PPP4R3AQ6IN85 833 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 RDM1Q8NG50 284 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 LINC01599Q8WXQ3 324 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 WASF1Q92558 559 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 TNFRSF25Q93038 417 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 PRDM6Q9NQX0 595 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 TCEAL9Q9UHQ7 104 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 SAMM50Q9Y512 469 aa22.24■■□□□ 1.15
SCARF1-208ENST00000574545 TTC3P53804 2025 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 JAK3P52333 1124 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 UGCGQ16739 394 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 CKAP2LQ8IYA6 745 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 CRIPAKQ8N1N5 446 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 LINC01465Q8N7H1 131 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 PPM1EQ8WY54 764 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 FAM167AQ96KS9 214 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 TGS1Q96RS0 853 aaKnown RBP22.23■■□□□ 1.15
SCARF1-208ENST00000574545 SUGCTQ9HAC7 445 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 CDHR5Q9HBB8 845 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 KCNMB3Q9NPA1 279 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 DDX25Q9UHL0 483 aaKnown RBP22.23■■□□□ 1.15
SCARF1-208ENST00000574545 PADI3Q9ULW8 664 aa22.23■■□□□ 1.15
SCARF1-208ENST00000574545 CCDC194A0A1B0GVG4 234 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 DLL1O00548 723 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 CHMP2AO43633 222 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 JAK2O60674 1132 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 UPP2O95045 317 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 STBD1O95210 358 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 CCDC85BQ15834 202 aaPredicted RBP22.22■■□□□ 1.15
SCARF1-208ENST00000574545 LETM2Q2VYF4 491 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 PIK3AP1Q6ZUJ8 805 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 NEK8Q86SG6 692 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 RC3H2Q9HBD1 1191 aaKnown RBP22.22■■□□□ 1.15
SCARF1-208ENST00000574545 XIRP2A4UGR9 3374 aa22.22■■□□□ 1.15
SCARF1-208ENST00000574545 LOXHD1Q8IVV2 1947 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 COL4A6Q14031 1691 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 M0QZ92 97 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 OATP04181 439 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 NR5A1Q13285 461 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 KRT40Q6A162 431 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 TRMT1LQ7Z2T5 733 aaKnown RBP22.21■■□□□ 1.15
SCARF1-208ENST00000574545 TMEM40Q8WWA1 233 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 NRBP2Q9NSY0 501 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 CEP131Q9UPN4 1083 aa22.21■■□□□ 1.15
SCARF1-208ENST00000574545 FAM205CA6NFA0 338 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 MAGEB2O15479 319 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 GCFC2P16383 781 aaKnown RBP22.2■■□□□ 1.14
SCARF1-208ENST00000574545 PRKCEQ02156 737 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 TARBP2Q15633 366 aaKnown RBP22.2■■□□□ 1.14
SCARF1-208ENST00000574545 MIER3Q7Z3K6 550 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 HAS1Q92839 578 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 CEP89Q96ST8 783 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 C17orf80Q9BSJ5 609 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 FTHL17Q9BXU8 183 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 TMX1Q9H3N1 280 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 LMCD1Q9NZU5 365 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 LIMCH1Q9UPQ0 1083 aa22.2■■□□□ 1.14
SCARF1-208ENST00000574545 EML1O00423 815 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 GTPBP6O43824 516 aaPredicted RBP22.19■■□□□ 1.14
SCARF1-208ENST00000574545 GPR32O75388 356 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 KRT2P35908 639 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 ZNF689Q96CS4 500 aaPredicted RBP22.19■■□□□ 1.14
SCARF1-208ENST00000574545 FAM20AQ96MK3 541 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 YME1L1Q96TA2 773 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 COL25A1Q9BXS0 654 aaPredicted RBP22.19■■□□□ 1.14
SCARF1-208ENST00000574545 TSPYL2Q9H2G4 693 aaPredicted RBP22.19■■□□□ 1.14
SCARF1-208ENST00000574545 VAV3Q9UKW4 847 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 MTUS1Q9ULD2 1270 aa22.19■■□□□ 1.14
SCARF1-208ENST00000574545 NOC2LQ9Y3T9 749 aaKnown RBP22.19■■□□□ 1.14
SCARF1-208ENST00000574545 TBX3O15119 743 aa22.18■■□□□ 1.14
SCARF1-208ENST00000574545 MMP1P03956 469 aa22.18■■□□□ 1.14
SCARF1-208ENST00000574545 LINC00271P0C7V0 271 aa22.18■■□□□ 1.14
SCARF1-208ENST00000574545 PPP2R5CQ13362 524 aa22.18■■□□□ 1.14
SCARF1-208ENST00000574545 FAM43BQ6ZT52 329 aaPredicted RBP22.18■■□□□ 1.14
SCARF1-208ENST00000574545 GDPD5Q8WTR4 605 aa22.18■■□□□ 1.14
SCARF1-208ENST00000574545 NIFKQ9BYG3 293 aaKnown RBP22.18■■□□□ 1.14
SCARF1-208ENST00000574545 ERVK-5Q9HDB9 667 aa22.18■■□□□ 1.14
SCARF1-208ENST00000574545 TTC28Q96AY4 2481 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 BTBD18B2RXH4 712 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 CCNT1O60563 726 aaKnown RBP22.17■■□□□ 1.14
SCARF1-208ENST00000574545 VTNP04004 478 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 RBM25P49756 843 aaKnown RBP22.17■■□□□ 1.14
SCARF1-208ENST00000574545 CLCN3P51790 818 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 CRYBB1P53674 252 aaPredicted RBP22.17■■□□□ 1.14
SCARF1-208ENST00000574545 PAK2Q13177 524 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 TMEM266Q2M3C6 531 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 XKR3Q5GH77 459 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 EFCAB12Q6NXP0 572 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 METTL13Q8N6R0 699 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 SAMD11Q96NU1 681 aa22.17■■□□□ 1.14
SCARF1-208ENST00000574545 NAP1L4Q99733 375 aaKnown RBP22.17■■□□□ 1.14
SCARF1-208ENST00000574545 RPS6KA5O75582 802 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 DGKIO75912 1065 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 KIZQ2M2Z5 673 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 EPC2Q52LR7 807 aa22.16■■□□□ 1.14
SCARF1-208ENST00000574545 POTEDQ86YR6 584 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms