RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 NSUN3Q9H649 340 aaKnown RBP23.94■■□□□ 1.42
CHRNB1-206ENST00000574054 ZSWIM6Q9HCJ5 1215 aa23.94■■□□□ 1.42
CHRNB1-206ENST00000574054 PCDHA10Q9Y5I2 948 aa23.94■■□□□ 1.42
CHRNB1-206ENST00000574054 ZBTB42B2RXF5 422 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 C5orf67F2Z3F1 127 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 CPLX1O14810 134 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 NEFLP07196 543 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 LINC00271P0C7V0 271 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 STAG3L1P0CL83 205 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 SSRP1Q08945 709 aaKnown RBP23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 LEXMQ3ZCV2 418 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 PAN2Q504Q3 1202 aaKnown RBP23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 METTL13Q8N6R0 699 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 BBXQ8WY36 941 aaPredicted RBP23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 CLP1Q92989 425 aaKnown RBP23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 LENG9Q96B70 501 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 TMX1Q9H3N1 280 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 CDHR5Q9HBB8 845 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 GABBR1Q9UBS5 961 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 LRFN2Q9ULH4 789 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 MAFBQ9Y5Q3 323 aaPredicted RBP23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 RALGAPA2Q2PPJ7 1873 aa23.93■■□□□ 1.42
CHRNB1-206ENST00000574054 GRM6O15303 877 aa23.92■■□□□ 1.42
CHRNB1-206ENST00000574054 C22orf31O95567 290 aa23.92■■□□□ 1.42
CHRNB1-206ENST00000574054 UPF3BQ9BZI7 483 aaKnown RBP23.92■■□□□ 1.42
CHRNB1-206ENST00000574054 SH3GLB2Q9NR46 395 aa23.92■■□□□ 1.42
CHRNB1-206ENST00000574054 NOC2LQ9Y3T9 749 aaKnown RBP23.92■■□□□ 1.42
CHRNB1-206ENST00000574054 MRPL42Q9Y6G3 142 aaKnown RBP23.92■■□□□ 1.42
CHRNB1-206ENST00000574054 LOXHD1Q8IVV2 1947 aa23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 WDR64B1ANS9 1081 aa23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 H3BQ06 376 aaPredicted RBP23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 EPB41L2O43491 1005 aaKnown RBP23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 RPS6KA5O75582 802 aa23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 STK3Q13188 491 aa23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 KIZQ2M2Z5 673 aa23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 CMTR2Q8IYT2 770 aaKnown RBP23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 ERVK-5Q9HDB9 667 aa23.91■■□□□ 1.42
CHRNB1-206ENST00000574054 DENND3A2RUS2 1198 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 MSH4O15457 936 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 CHMP2AO43633 222 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 GAS7O60861 476 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 VTNP04004 478 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 COL9A1P20849 921 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 PTCRAQ6ISU1 281 aaPredicted RBP23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 FAM167AQ96KS9 214 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 LMAN2LQ9H0V9 348 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 DISC1Q9NRI5 854 aa23.9■■□□□ 1.42
CHRNB1-206ENST00000574054 MGEA5O60502 916 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 SARSP49591 514 aaKnown RBP23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 GATMP50440 423 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 USP11P51784 963 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 CLCN3P51790 818 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 ODR4Q5SWX8 454 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 CPLX2Q6PUV4 134 aaKnown RBP23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 CRIPAKQ8N1N5 446 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 TBCKQ8TEA7 893 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 TMEM40Q8WWA1 233 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 PABPC5Q96DU9 382 aaKnown RBP23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 ZNF274Q96GC6 653 aaPredicted RBP23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 OSMRQ99650 979 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 PLVAPQ9BX97 442 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 TM6SF1Q9BZW5 370 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 ALG13Q9NP73 1137 aaKnown RBP23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 CLDND1Q9NY35 253 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 ST3GAL5Q9UNP4 418 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 CEP131Q9UPN4 1083 aa23.89■■□□□ 1.41
CHRNB1-206ENST00000574054 EVPLQ92817 2033 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 DEXIO95424 95 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 LRCH2Q5VUJ6 765 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 ADAM2Q99965 735 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 TEKT3Q9BXF9 490 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 PDRG1Q9NUG6 133 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 PCDHA4Q9UN74 947 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 AKT3Q9Y243 479 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 PCDHB7Q9Y5E2 793 aa23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 MYH9P35579 1960 aaKnown RBP23.88■■□□□ 1.41
CHRNB1-206ENST00000574054 GPR182O15218 404 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 EDIL3O43854 480 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 IL9P15248 144 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 CRYBB1P53674 252 aaPredicted RBP23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 PRKCEQ02156 737 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 NEK9Q8TD19 979 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 SLC5A5Q92911 643 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 GJA10Q969M2 543 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 MAP7D2Q96T17 732 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 RIT2Q99578 217 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 C1QTNF1Q9BXJ1 281 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 C22orf23Q9BZE7 217 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 PLAGL2Q9UPG8 496 aa23.87■■□□□ 1.41
CHRNB1-206ENST00000574054 MAGEB2O15479 319 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 ZNF862O60290 1169 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 MMP1P03956 469 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 OATP04181 439 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 JAK3P52333 1124 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 PUS10Q3MIT2 529 aaKnown RBP23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 EFCAB12Q6NXP0 572 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 FAM228AQ86W67 206 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 BLIDQ8IZY5 108 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 LRRC71Q8N4P6 559 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms