RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	PAK2	Q13177	524 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	MKRN4P	Q13434	485 aa	Predicted RBP	13.46	□□□□□ -0.25
ABR-222	ENST00000573667	ODR4	Q5SWX8	454 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	PPP4R3A	Q6IN85	833 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	METTL13	Q8N6R0	699 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	GJA10	Q969M2	543 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.46	□□□□□ -0.25
ABR-222	ENST00000573667	MBOAT7	Q96N66	472 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	TGS1	Q96RS0	853 aa	Known RBP	13.46	□□□□□ -0.25
ABR-222	ENST00000573667	FTHL17	Q9BXU8	183 aa		13.46	□□□□□ -0.25
ABR-222	ENST00000573667	EYS	Q5T1H1	3165 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	KDM3A	Q9Y4C1	1321 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.45	□□□□□ -0.26
ABR-222	ENST00000573667	COL4A6	Q14031	1691 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.45	□□□□□ -0.26
ABR-222	ENST00000573667	LINC01553	A4QN01	128 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	RFXAP	O00287	272 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	SLC37A4	O43826	429 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	JAK2	O60674	1132 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	BAG4	O95429	457 aa	Known RBP	13.45	□□□□□ -0.26
ABR-222	ENST00000573667	MMP1	P03956	469 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	CD52	P31358	61 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	FOSB	P53539	338 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	PRKCE	Q02156	737 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	ADGRE1	Q14246	886 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	CCDC85B	Q15834	202 aa	Predicted RBP	13.45	□□□□□ -0.26
ABR-222	ENST00000573667	CCDC83	Q8IWF9	413 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	MICALL1	Q8N3F8	863 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	ETNPPL	Q8TBG4	499 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	OXER1	Q8TDS5	423 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	FAM20A	Q96MK3	541 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.45	□□□□□ -0.26
ABR-222	ENST00000573667	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.45	□□□□□ -0.26
ABR-222	ENST00000573667	MTUS1	Q9ULD2	1270 aa		13.45	□□□□□ -0.26
ABR-222	ENST00000573667	ZBTB42	B2RXF5	422 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	RBAK-RBAKDN	I3L0D1	243 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	TBX3	O15119	743 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	DKC1	O60832	514 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	ARHGEF15	O94989	841 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	C22orf31	O95567	290 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	HTRA4	P83105	476 aa	Predicted RBP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	NFX1	Q12986	1120 aa	Known RBP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	NR5A1	Q13285	461 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	SAFB	Q15424	915 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	EFCAB12	Q6NXP0	572 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	KIAA0319L	Q8IZA0	1049 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	MAP7D2	Q96T17	732 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	LLPH	Q9BRT6	129 aa	Known RBP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	AGO3	Q9H9G7	860 aa	Known RBP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.44	□□□□□ -0.26
ABR-222	ENST00000573667	PADI3	Q9ULW8	664 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	AKT3	Q9Y243	479 aa		13.44	□□□□□ -0.26
ABR-222	ENST00000573667	ENPP3	O14638	875 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	GPR182	O15218	404 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	ZNF862	O60290	1169 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	RPS6KA5	O75582	802 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	RBM25	P49756	843 aa	Known RBP	13.43	□□□□□ -0.26
ABR-222	ENST00000573667	ERVK-21	P61565	698 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	PSMC5	P62195	406 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	TBC1D8B	Q0IIM8	1120 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	PPP2R5C	Q13362	524 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	UGCG	Q16739	394 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	XKR3	Q5GH77	459 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	KRT40	Q6A162	431 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.43	□□□□□ -0.26
ABR-222	ENST00000573667	DIS3L2	Q8IYB7	885 aa	Known RBP	13.43	□□□□□ -0.26
ABR-222	ENST00000573667	SLFN12	Q8IYM2	578 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	ZNF710	Q8N1W2	664 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	FAM184A	Q8NB25	1140 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	SP7	Q8TDD2	431 aa	Predicted RBP	13.43	□□□□□ -0.26
ABR-222	ENST00000573667	SAMD11	Q96NU1	681 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	PPP1R16B	Q96T49	567 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	SUGCT	Q9HAC7	445 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	KCNMB3	Q9NPA1	279 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	CHD9	Q3L8U1	2897 aa		13.43	□□□□□ -0.26
ABR-222	ENST00000573667	EPOP	A6NHQ4	379 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	BTBD18	B2RXH4	712 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	ST18	O60284	1047 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	VTN	P04004	478 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	STAG3L1	P0CL83	205 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	POU3F3	P20264	500 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-222	ENST00000573667	CLCN3	P51790	818 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	CRYBB1	P53674	252 aa	Predicted RBP	13.42	□□□□□ -0.26
ABR-222	ENST00000573667	HMGN5	P82970	282 aa	Known RBP	13.42	□□□□□ -0.26
ABR-222	ENST00000573667	GRB10	Q13322	594 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	RABEP1	Q15276	862 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	SKIV2L	Q15477	1246 aa	Known RBP	13.42	□□□□□ -0.26
ABR-222	ENST00000573667	KIZ	Q2M2Z5	673 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	TMEM266	Q2M3C6	531 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	MTERF2	Q49AM1	385 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	EARS2	Q5JPH6	523 aa	Known RBP	13.42	□□□□□ -0.26
ABR-222	ENST00000573667	B3GNT9	Q6UX72	402 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	POTED	Q86YR6	584 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	LRRC71	Q8N4P6	559 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	FIBCD1	Q8N539	461 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	BANK1	Q8NDB2	785 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	FBXO22	Q8NEZ5	403 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	GDPD5	Q8WTR4	605 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	C8orf76	Q96K31	380 aa		13.42	□□□□□ -0.26
ABR-222	ENST00000573667	SCLT1	Q96NL6	688 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms