RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 TMEM150BA6NC51 233 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 NRDCO43847 1150 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 ZNF862O60290 1169 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 USO1O60763 962 aaKnown RBP22.69■■□□□ 1.22
CHRNE-202ENST00000572438 NEDD9Q14511 834 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 ODR4Q5SWX8 454 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 ANO5Q75V66 913 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 OTUD6AQ7L8S5 288 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 PPFIBP1Q86W92 1011 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 CCDC60Q8IWA6 550 aaPredicted RBP22.69■■□□□ 1.22
CHRNE-202ENST00000572438 FAM178BQ8IXR5 827 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 C17orf53Q8N3J3 647 aaPredicted RBP22.69■■□□□ 1.22
CHRNE-202ENST00000572438 MORC4Q8TE76 937 aa22.69■■□□□ 1.22
CHRNE-202ENST00000572438 NOC4LQ9BVI4 516 aaKnown RBP22.69■■□□□ 1.22
CHRNE-202ENST00000572438 A0A1W2PQC6 194 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 LRRC37A2A6NM11 1700 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 PDXKO00764 312 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 STBD1O95210 358 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 ATG7O95352 703 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 NMT1P30419 496 aaKnown RBP22.68■■□□□ 1.22
CHRNE-202ENST00000572438 DNM2P50570 870 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 NOLC1Q14978 699 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHRNE-202ENST00000572438 PLA2G4FQ68DD2 849 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 STXBP4Q6ZWJ1 553 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 ZNF720Q7Z2F6 126 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHRNE-202ENST00000572438 UBE4BO95155 1302 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 SYNGAP1Q96PV0 1343 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 PES1O00541 588 aaKnown RBP22.68■■□□□ 1.22
CHRNE-202ENST00000572438 FARP2O94887 1054 aaPredicted RBP22.68■■□□□ 1.22
CHRNE-202ENST00000572438 GOLGA8FQ08AF8 430 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 GOLGA8DPQ0D2H9 430 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 MIIPQ5JXC2 388 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 KCNV1Q6PIU1 500 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 EEPD1Q7L9B9 569 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 TC2NQ8N9U0 490 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 CCDC112Q8NEF3 446 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 SPTLC3Q9NUV7 552 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 IGSF9BQ9UPX0 1349 aa22.68■■□□□ 1.22
CHRNE-202ENST00000572438 CALUO43852 315 aaPredicted RBP22.67■■□□□ 1.22
CHRNE-202ENST00000572438 GNA14O95837 355 aa22.67■■□□□ 1.22
CHRNE-202ENST00000572438 NPEPPSP55786 919 aa22.67■■□□□ 1.22
CHRNE-202ENST00000572438 TRMT1LQ7Z2T5 733 aaKnown RBP22.67■■□□□ 1.22
CHRNE-202ENST00000572438 ABRAQ8N0Z2 381 aa22.67■■□□□ 1.22
CHRNE-202ENST00000572438 ZNF784Q8NCA9 323 aaPredicted RBP22.67■■□□□ 1.22
CHRNE-202ENST00000572438 SH2D3AQ9BRG2 576 aa22.67■■□□□ 1.22
CHRNE-202ENST00000572438 TYW1Q9NV66 732 aaKnown RBP22.67■■□□□ 1.22
CHRNE-202ENST00000572438 LARSQ9P2J5 1176 aaKnown RBP22.67■■□□□ 1.22
CHRNE-202ENST00000572438 ASB14A6NK59 587 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 AKR1B15C9JRZ8 316 aaPredicted RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 PRKCEQ02156 737 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 RBL2Q08999 1139 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 ADAM9Q13443 819 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 TRIM14Q14142 442 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 MAN2A1Q16706 1144 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 MAEAQ7L5Y9 396 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 DRC1Q96MC2 740 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 TMX1Q9H3N1 280 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 STRNO43815 780 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 MAPTP10636 758 aaKnown RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 ZNF157P51786 506 aaPredicted RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 ADKP55263 362 aaKnown RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 VWA3BQ502W6 1294 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 ZC2HC1CQ53FD0 456 aaPredicted RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 CEP135Q66GS9 1140 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 RASAL3Q86YV0 1011 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 CEP170P1Q96L14 293 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 ZNF302Q9NR11 478 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 DDX41Q9UJV9 622 aaKnown RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 PCDHB13Q9Y5F0 798 aa22.66■■□□□ 1.22
CHRNE-202ENST00000572438 MAFBQ9Y5Q3 323 aaPredicted RBP22.66■■□□□ 1.22
CHRNE-202ENST00000572438 CETN3O15182 167 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 NKRFO15226 690 aaKnown RBP eCLIP22.65■■□□□ 1.22
CHRNE-202ENST00000572438 GGPS1O95749 300 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 TPM1P09493 284 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 PLS3P13797 630 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 MARSP56192 900 aaKnown RBP22.65■■□□□ 1.22
CHRNE-202ENST00000572438 KCNA1Q09470 495 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 FAM110CQ1W6H9 321 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 ZNF792Q3KQV3 632 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 CCDC40Q4G0X9 1142 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 XKR3Q5GH77 459 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 METTL7BQ6UX53 244 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 STRA6Q9BX79 667 aa22.65■■□□□ 1.22
CHRNE-202ENST00000572438 IGKV6D-21A0A0A0MT36 114 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 KIF3CO14782 793 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 GYPCP04921 128 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 NR2F2P24468 414 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 ADORA2AP29274 412 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 TBC1D8BQ0IIM8 1120 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 LY6KQ17RY6 165 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 FKBP15Q5T1M5 1219 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 NDST4Q9H3R1 872 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 IVNS1ABPQ9Y6Y0 642 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 DOCK5Q9H7D0 1870 aa22.64■■□□□ 1.22
CHRNE-202ENST00000572438 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.21
CHRNE-202ENST00000572438 GSTTP1A0A1W2PQM5 241 aa22.64■■□□□ 1.21
CHRNE-202ENST00000572438 MFAP3LO75121 409 aa22.64■■□□□ 1.21
CHRNE-202ENST00000572438 PPP1R37O75864 691 aa22.64■■□□□ 1.21
CHRNE-202ENST00000572438 ARIH2O95376 493 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms