RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 DNAJC19Q96DA6 116 aa18.27■□□□□ 0.51
LITAF-209ENST00000571688 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.51
LITAF-209ENST00000571688 ARHGEF3Q9NR81 526 aa18.27■□□□□ 0.51
LITAF-209ENST00000571688 ATP8A2Q9NTI2 1148 aa18.27■□□□□ 0.51
LITAF-209ENST00000571688 USP15Q9Y4E8 981 aaPredicted RBP18.27■□□□□ 0.51
LITAF-209ENST00000571688 TLDC2A0PJX2 215 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 A8MUI8 341 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 FGGP02679 453 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
LITAF-209ENST00000571688 PRKCIP41743 596 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 NPEPPSP55786 919 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 COPS2P61201 443 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 TFAP4Q01664 338 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 TMEM119Q4V9L6 283 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 ANKRD20A2Q5SQ80 823 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 ANKRD20A1Q5TYW2 823 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 ANKRD20A3Q5VUR7 823 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 GBP7Q8N8V2 638 aaPredicted RBP18.26■□□□□ 0.51
LITAF-209ENST00000571688 PIGBQ92521 554 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 SPDYE3A6NKU9 549 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 FLOT1O75955 427 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 ANXA13P27216 316 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 CNGA2Q16280 664 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 SUSD4Q5VX71 490 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 ZDHHC24Q6UX98 284 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 CROCCP2Q86T23 111 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 ZC3H3Q8IXZ2 948 aaKnown RBP18.26■□□□□ 0.51
LITAF-209ENST00000571688 KLHL29Q96CT2 875 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 TMEM109Q9BVC6 243 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
LITAF-209ENST00000571688 CNOT7Q9UIV1 285 aaKnown RBP18.26■□□□□ 0.51
LITAF-209ENST00000571688 PALM3A6NDB9 673 aaPredicted RBP18.25■□□□□ 0.51
LITAF-209ENST00000571688 LUC7L3O95232 432 aaKnown RBP18.25■□□□□ 0.51
LITAF-209ENST00000571688 LINGO3P0C6S8 592 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ABL2P42684 1182 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 IFNAR2P48551 515 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 DR1Q01658 176 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 CCDC152Q4G0S7 254 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 FAM26FQ5R3K3 315 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 PARD3BQ8TEW8 1205 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 NSUN4Q96CB9 384 aaKnown RBP18.25■□□□□ 0.51
LITAF-209ENST00000571688 DAAM1Q9Y4D1 1078 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 CD2APQ9Y5K6 639 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 RPTORQ8N122 1335 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 FAM187AA6NFU0 413 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ENO4A6NNW6 628 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ADAMTS2O95450 1211 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 H2AFZP0C0S5 128 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ACTN1P12814 892 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ATP2A2P16615 1042 aaKnown RBP18.25■□□□□ 0.51
LITAF-209ENST00000571688 EPS15P42566 896 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 KCNH2Q12809 1159 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 SLC29A2Q14542 456 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 PPP2R5EQ16537 467 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 CALCRLQ16602 461 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 H2AFVQ71UI9 128 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ASRGL1Q7L266 308 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 NUDT12Q9BQG2 462 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 FGFBP2Q9BYJ0 223 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 C6orf50Q9HD87 102 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 ADAM22Q9P0K1 906 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 GGT7Q9UJ14 662 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 INTUQ9ULD6 942 aa18.25■□□□□ 0.51
LITAF-209ENST00000571688 SMIM23A6NLE4 172 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 GNA11P29992 359 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 MSH2P43246 934 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 SPDYE1Q8NFV5 336 aaPredicted RBP18.24■□□□□ 0.51
LITAF-209ENST00000571688 ANKRD27Q96NW4 1050 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 AMFRQ9UKV5 643 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 COL4A1P02462 1669 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 UCHL3P15374 230 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 DRG2P55039 364 aaKnown RBP18.24■□□□□ 0.51
LITAF-209ENST00000571688 TMEM266Q2M3C6 531 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
LITAF-209ENST00000571688 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
LITAF-209ENST00000571688 SNX29Q8TEQ0 813 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 IFT74Q96LB3 600 aa18.24■□□□□ 0.51
LITAF-209ENST00000571688 POTEMA6NI47 508 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 DDX3YO15523 660 aaKnown RBP18.23■□□□□ 0.51
LITAF-209ENST00000571688 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
LITAF-209ENST00000571688 PLTPP55058 493 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 NBPF20Q3BBV1 942 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 DCAF12L1Q5VU92 463 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 KIF2BQ8N4N8 673 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 FBXO25Q8TCJ0 367 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
LITAF-209ENST00000571688 KIAA0391O15091 583 aaKnown RBP18.23■□□□□ 0.51
LITAF-209ENST00000571688 WFS1O76024 890 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 SUN1O94901 812 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 SLC9A1P19634 815 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 DHX34Q14147 1143 aaKnown RBP18.23■□□□□ 0.51
LITAF-209ENST00000571688 PDIA5Q14554 519 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 KIAA1755Q5JYT7 1200 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
LITAF-209ENST00000571688 ZBTB10Q96DT7 871 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 SLC4A9Q96Q91 983 aa18.23■□□□□ 0.51
LITAF-209ENST00000571688 LZTS2Q9BRK4 669 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms