RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 I3L4J1 428 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 NR3C1P04150 777 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 MAN1A1P33908 653 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 SESN3P58005 492 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 CFAP157Q5JU67 520 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 PALM2Q8IXS6 379 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 EPN3Q9H201 632 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 DNAJC17Q9NVM6 304 aaKnown RBP12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 SCN11AQ9UI33 1791 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 LSP1P33241 339 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 ZNF211Q13398 564 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 ITPK1Q13572 414 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 KAZNQ674X7 775 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 HVCN1Q96D96 273 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 NACC1Q96RE7 527 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 ERGIC2Q96RQ1 377 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 ANAPC5Q9UJX4 755 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 PLAGL2Q9UPG8 496 aa12.03□□□□□ -0.48
PCDHGA4-201ENST00000571252 TCRBV5S4A2TA0A5A2 114 aa12.02□□□□□ -0.48
PCDHGA4-201ENST00000571252 PODXLO00592 558 aa12.02□□□□□ -0.48
PCDHGA4-201ENST00000571252 HSPA1LP34931 641 aa12.02□□□□□ -0.48
PCDHGA4-201ENST00000571252 PTK2Q05397 1052 aa12.02□□□□□ -0.48
PCDHGA4-201ENST00000571252 ABCB5Q2M3G0 1257 aa12.02□□□□□ -0.48
PCDHGA4-201ENST00000571252 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.48
PCDHGA4-201ENST00000571252 SMIM22K7EJ46 135 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 PLEKP08567 350 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 FGFR2P21802 821 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 MXI1P50539 228 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 AOC3Q16853 763 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 NBPF9Q3BBW0 867 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 LGSNQ5TDP6 509 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 GDAP1Q8TB36 358 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 DNAJC7Q99615 494 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 MYMKA6NI61 221 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 NDC80O14777 642 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 TNFAIP1Q13829 316 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 TRIP13Q15645 432 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 KNOP1Q1ED39 458 aaKnown RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZNF473Q8WTR7 871 aaKnown RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 EHD2Q9NZN4 543 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 MRC1P22897 1456 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 PAPD7Q5XG87 772 aaKnown RBP12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 KLC4Q9NSK0 619 aa12.02□□□□□ -0.49
PCDHGA4-201ENST00000571252 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 MIF4GDA9UHW6 222 aaKnown RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 PHBP35232 272 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 SEC24CP53992 1094 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 BFSP1Q12934 665 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 NT5DC1Q5TFE4 455 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 NEDD1Q8NHV4 660 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 PIGOQ8TEQ8 1089 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 POMGNT1Q8WZA1 660 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZNF577Q9BSK1 485 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 WDR11Q9BZH6 1224 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 A0A1W2PQJ5 194 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 POTEFA5A3E0 1075 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 LUC7L3O95232 432 aaKnown RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 CTTNQ14247 550 aaKnown RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 TAB3Q8N5C8 712 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 RILPQ96NA2 401 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 DIS3Q9Y2L1 958 aaKnown RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 SYNGAP1Q96PV0 1343 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZBTB5O15062 677 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 GLYCTKQ8IVS8 523 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 CAPN6Q9Y6Q1 641 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 BMP6P22004 513 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 PMS2P54278 862 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 PDIA5Q14554 519 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 TMED2Q15363 201 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 APBB1IPQ7Z5R6 666 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 GBP7Q8N8V2 638 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA4-201ENST00000571252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.01□□□□□ -0.491e-7■■■■■ 78
PCDHGA4-201ENST00000571252 INTS13Q9NVM9 706 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms