RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 EHMT1Q9H9B1 1298 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 MRS2Q9HD23 443 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
CHD3-213ENST00000571249 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
CHD3-213ENST00000571249 KLK13Q9UKR3 277 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 CCPG1Q9ULG6 757 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 FRMPD2Q68DX3 1309 aaPredicted RBP8.18□□□□□ -1.1
CHD3-213ENST00000571249 DOCK8Q8NF50 2099 aa8.18□□□□□ -1.1
CHD3-213ENST00000571249 RELNP78509 3460 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 CREBBPQ92793 2442 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 NBPF19A0A087WUL8 3843 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 HYAL3O43820 417 aaPredicted RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 CLCN1P35523 988 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 PBX3P40426 434 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 ATP8B2P98198 1209 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 SIM2Q14190 667 aaPredicted RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 FAM26DQ5JW98 314 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 TMC7Q7Z402 723 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 MRPL43Q8N983 215 aaKnown RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 GMCL1P1Q8NEA9 526 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 MRPS27Q92552 414 aaKnown RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 MKL1Q969V6 931 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 CRELD1Q96HD1 420 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 MPHOSPH6Q99547 160 aaKnown RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 GPR20Q99678 358 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 CCDC8Q9H0W5 538 aaPredicted RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 AGO3Q9H9G7 860 aaKnown RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 NGRNQ9NPE2 291 aaKnown RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 PRMT8Q9NR22 394 aaPredicted RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 ATP8A2Q9NTI2 1148 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 TYW1Q9NV66 732 aaKnown RBP8.17□□□□□ -1.1
CHD3-213ENST00000571249 ZNF532Q9HCE3 1301 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 PTPRQQ9UMZ3 2332 aa8.17□□□□□ -1.1
CHD3-213ENST00000571249 URB1O60287 2271 aaKnown RBP8.16□□□□□ -1.1
CHD3-213ENST00000571249 SEC24BO95487 1268 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 MYH8P13535 1937 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 HOXC8P31273 242 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 CD52P31358 61 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 GBP2P32456 591 aaPredicted RBP8.16□□□□□ -1.1
CHD3-213ENST00000571249 GPC5P78333 572 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 MTAPQ13126 283 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 OS9Q13438 667 aaPredicted RBP8.16□□□□□ -1.1
CHD3-213ENST00000571249 LETM2Q2VYF4 491 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 MIA3Q5JRA6 1907 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 FAM102BQ5T8I3 360 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 GPR149Q86SP6 731 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 NPAS4Q8IUM7 802 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 OXER1Q8TDS5 423 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 MYADMQ96S97 322 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 RPP25Q9BUL9 199 aaKnown RBP8.16□□□□□ -1.1
CHD3-213ENST00000571249 DDX23Q9BUQ8 820 aaKnown RBP8.16□□□□□ -1.1
CHD3-213ENST00000571249 MKNK2Q9HBH9 465 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 SETD4Q9NVD3 440 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 DDX41Q9UJV9 622 aaKnown RBP8.16□□□□□ -1.1
CHD3-213ENST00000571249 PRR12Q9ULL5 1215 aa8.16□□□□□ -1.1
CHD3-213ENST00000571249 DENND4AQ7Z401 1863 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 ZBED9Q6R2W3 1325 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 IGKV6D-41A0A0C4DH26 115 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 PNMA6EA0A0J9YXQ4 647 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 TCRBV5S4A2TA0A5A2 114 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 TBKBP1A7MCY6 615 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 J3QKU1 62 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 AXIN1O15169 862 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 CAND2O75155 1236 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 MBD4O95243 580 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 ICAM1P05362 532 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 HMGB1P09429 215 aaKnown RBP8.15□□□□□ -1.1
CHD3-213ENST00000571249 RASA1P20936 1047 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 CA8P35219 290 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 SLC1A4P43007 532 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 FOXK1P85037 733 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 PLCB3Q01970 1234 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 FZD5Q13467 585 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 SH3PXD2AQ5TCZ1 1133 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 CTR9Q6PD62 1173 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 RNF207Q6ZRF8 634 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 RASGRP2Q7LDG7 609 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.15□□□□□ -1.1
CHD3-213ENST00000571249 TMEFF1Q8IYR6 380 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 C12orf50Q8NA57 414 aaPredicted RBP8.15□□□□□ -1.1
CHD3-213ENST00000571249 TMC2Q8TDI7 906 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 AUTS2Q8WXX7 1259 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 CEP95Q96GE4 821 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 C16orf70Q9BSU1 422 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 ARRDC1-AS1Q9H2J1 176 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 CWH43Q9H720 699 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.1
CHD3-213ENST00000571249 LZTS1Q9Y250 596 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 MSRB2Q9Y3D2 182 aa8.15□□□□□ -1.1
CHD3-213ENST00000571249 B4DLN1 442 aa8.14□□□□□ -1.11
CHD3-213ENST00000571249 TTLL1O95922 423 aa8.14□□□□□ -1.11
CHD3-213ENST00000571249 GNAI3P08754 354 aa8.14□□□□□ -1.11
CHD3-213ENST00000571249 MCCP23508 829 aa8.14□□□□□ -1.11
CHD3-213ENST00000571249 TARSP26639 723 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms