RNA–Protein interactions for RNA: ENST00000570641.1

SPNS2-202, Transcript of sphingolipid transporter 2, humanhuman

TSL 5

Gene SPNS2, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-202ENST00000570641 DNAJC19Q96DA6 116 aa20.12■□□□□ 0.81
SPNS2-202ENST00000570641 EXOC1Q9NV70 894 aa20.12■□□□□ 0.81
SPNS2-202ENST00000570641 A6NJR5 290 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 KLRC4O43908 158 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 LGALS2P05162 132 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 IDEP14735 1019 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 GUCY2CP25092 1073 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 GRK4P32298 578 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 MORC3Q14149 939 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 KMT5BQ4FZB7 885 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 MAP3K21Q5TCX8 1036 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 PLA2G4FQ68DD2 849 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 PADI6Q6TGC4 694 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 C1orf186Q6ZWK4 172 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 BBXQ8WY36 941 aaPredicted RBP20.11■□□□□ 0.81
SPNS2-202ENST00000570641 CEP170P1Q96L14 293 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 RUSC1Q9BVN2 902 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 TIPINQ9BVW5 301 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 NIFKQ9BYG3 293 aaKnown RBP20.11■□□□□ 0.81
SPNS2-202ENST00000570641 SPC25Q9HBM1 224 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 ERAP1Q9NZ08 941 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 ZNF215Q9UL58 517 aaPredicted RBP20.11■□□□□ 0.81
SPNS2-202ENST00000570641 PPME1Q9Y570 386 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 PTCH2Q9Y6C5 1203 aa20.11■□□□□ 0.81
SPNS2-202ENST00000570641 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
SPNS2-202ENST00000570641 RHOBTB3O94955 611 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 RARBP10826 455 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 GIT2Q14161 759 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 ISM2Q6H9L7 571 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 TRMT1LQ7Z2T5 733 aaKnown RBP20.1■□□□□ 0.81
SPNS2-202ENST00000570641 TRIM50Q86XT4 487 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 ATP8B4Q8TF62 1192 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 LENG1Q96BZ8 264 aaPredicted RBP20.1■□□□□ 0.81
SPNS2-202ENST00000570641 CYP26B1Q9NR63 512 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 PANK4Q9NVE7 773 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 DACH1Q9UI36 760 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 ODF2LQ9ULJ1 636 aa20.1■□□□□ 0.81
SPNS2-202ENST00000570641 NPHP3-ACAD11A0A0J9YXS1 232 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 TMEM150BA6NC51 233 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 HBP1O60381 514 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 USO1O60763 962 aaKnown RBP20.09■□□□□ 0.81
SPNS2-202ENST00000570641 CAVIN2O95810 425 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 INHAP05111 366 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 CCND3P30281 292 aaPredicted RBP20.09■□□□□ 0.81
SPNS2-202ENST00000570641 NPEPPSP55786 919 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 GJA9P57773 515 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 PSMD2Q13200 908 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 MTERF2Q49AM1 385 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 ZNF658Q5TYW1 1059 aaPredicted RBP20.09■□□□□ 0.81
SPNS2-202ENST00000570641 REEP2Q9BRK0 252 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 UPF3AQ9H1J1 476 aaKnown RBP20.09■□□□□ 0.81
SPNS2-202ENST00000570641 KAT6AQ92794 2004 aa20.09■□□□□ 0.81
SPNS2-202ENST00000570641 KPNA6O60684 536 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 DGAT1O75907 488 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 GAP43P17677 238 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 MARK3P27448 753 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 RFC5P40937 340 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 LBX1P52954 281 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 COASYQ13057 564 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 PLCB4Q15147 1175 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 ANO6Q4KMQ2 910 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 MLKLQ8NB16 471 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 C16orf70Q9BSU1 422 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 NAT10Q9H0A0 1025 aaKnown RBP20.08■□□□□ 0.81
SPNS2-202ENST00000570641 PTPN22Q9Y2R2 807 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 COL4A3BPQ9Y5P4 624 aa20.08■□□□□ 0.81
SPNS2-202ENST00000570641 FRMD3A2A2Y4 597 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 MSCO60682 206 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 FAM13AO94988 1023 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 ZNF286BP0CG31 522 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 HSPA8P11142 646 aaKnown RBP20.07■□□□□ 0.8
SPNS2-202ENST00000570641 NKX3-2P78367 333 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
SPNS2-202ENST00000570641 RAD51AP2Q09MP3 1159 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 FSCN1Q16658 493 aaKnown RBP20.07■□□□□ 0.8
SPNS2-202ENST00000570641 DPCR1Q3MIW9 517 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 EXOC8Q8IYI6 725 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 MCPH1Q8NEM0 835 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 DNAJC25Q9H1X3 360 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 ZHX3Q9H4I2 956 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 HMX1Q9NP08 348 aaPredicted RBP20.07■□□□□ 0.8
SPNS2-202ENST00000570641 TRPC6Q9Y210 931 aa20.07■□□□□ 0.8
SPNS2-202ENST00000570641 SYNRGQ9UMZ2 1314 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 H3BRB1 525 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 ZEB2O60315 1214 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 HIP1RO75146 1068 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 C6orf222P0C671 652 aaPredicted RBP20.06■□□□□ 0.8
SPNS2-202ENST00000570641 PPP1R2P41236 205 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 POLGP54098 1239 aaPredicted RBP20.06■□□□□ 0.8
SPNS2-202ENST00000570641 EHHADHQ08426 723 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 TARBP2Q15633 366 aaKnown RBP20.06■□□□□ 0.8
SPNS2-202ENST00000570641 HERC4Q5GLZ8 1057 aaPredicted RBP20.06■□□□□ 0.8
SPNS2-202ENST00000570641 CT47A1Q5JQC4 288 aaPredicted RBP20.06■□□□□ 0.8
SPNS2-202ENST00000570641 ZNF484Q5JVG2 852 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 ABHD8Q96I13 439 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 DRC1Q96MC2 740 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 SH2D3AQ9BRG2 576 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 TUT1Q9H6E5 874 aaKnown RBP20.06■□□□□ 0.8
SPNS2-202ENST00000570641 ATP6V0A4Q9HBG4 840 aa20.06■□□□□ 0.8
SPNS2-202ENST00000570641 XPNPEP3Q9NQH7 507 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms