RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 NEMFO60524 1076 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 MED24O75448 989 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 CXCL10P02778 98 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 OATP04181 439 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 SPATA31C1P0DKV0 1188 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 GCFC2P16383 781 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 SYT1P21579 422 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 FGFR4P22455 802 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 TECP42680 631 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 MCM2P49736 904 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 GRIN1Q05586 938 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 PTGDRQ13258 359 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 PKP1Q13835 747 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 LRIT3Q3SXY7 679 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 FAM26DQ5JW98 314 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 TPH2Q8IWU9 490 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 SMAP1Q8IYB5 467 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 LINC01465Q8N7H1 131 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 PIGOQ8TEQ8 1089 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 LINC01599Q8WXQ3 324 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 HSD17B14Q9BPX1 270 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 SUGCTQ9HAC7 445 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
GTF3C1-212ENST00000570129 LCHNA4D1U4 455 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 VPS37CA5D8V6 355 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 RRN3P2A6NIE6 340 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 H3BQV1 296 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 CD52P31358 61 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 JAK3P52333 1124 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 MRPS6P82932 125 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 GNL2Q13823 731 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 EPHA7Q15375 998 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 KIZQ2M2Z5 673 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 ZNF484Q5JVG2 852 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 SNX21Q969T3 373 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 NKX2-4Q9H2Z4 354 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 TMX1Q9H3N1 280 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 MTMR6Q9Y217 621 aa11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 NOC2LQ9Y3T9 749 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-212ENST00000570129 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 RFXAPO00287 272 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 TBX3O15119 743 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 MGEA5O60502 916 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 GPR32O75388 356 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 GNAT1P11488 350 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 SFNP31947 248 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 QARSP47897 775 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 WDR5P61964 334 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 PSMC5P62195 406 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 RESTQ13127 1097 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 PLEKHG4Q58EX7 1191 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 FBXO47Q5MNV8 452 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 RPUSD2Q8IZ73 545 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 LRRC15Q8TF66 581 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 TMEM143Q96AN5 459 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 PLIN2Q99541 437 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 LXNQ9BS40 222 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 NIFKQ9BYG3 293 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 PBX4Q9BYU1 374 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 ADAMTS10Q9H324 1103 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 NRBP2Q9NSY0 501 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 TCEAL9Q9UHQ7 104 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 CLIC4Q9Y696 253 aa11.02□□□□□ -0.65
GTF3C1-212ENST00000570129 CHD7Q9P2D1 2997 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 SMIM35A0A1B0GVV1 85 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 EPOPA6NHQ4 379 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 BAG4O95429 457 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 P4HBP07237 508 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 OR52Z1P0C646 297 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 GATMP50440 423 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 XKR3Q5GH77 459 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 PSRC1Q6PGN9 363 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 KCNK18Q7Z418 384 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 CATSPER3Q86XQ3 398 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 DEFB123Q8N688 67 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 OSMRQ99650 979 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 MMTAG2Q9BU76 263 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 CELF4Q9BZC1 486 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 SLC4A7Q9Y6M7 1214 aa11.01□□□□□ -0.65
GTF3C1-212ENST00000570129 IGKV6-21A0A0C4DH24 114 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 HSFX4A0A1B0GTS1 333 aaPredicted RBP11□□□□□ -0.65
GTF3C1-212ENST00000570129 HSFX3A0A1B0GWH4 333 aaPredicted RBP11□□□□□ -0.65
GTF3C1-212ENST00000570129 ENPP3O14638 875 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 UPP2O95045 317 aa11□□□□□ -0.65
GTF3C1-212ENST00000570129 ATP2A2P16615 1042 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms