RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 HMGN5P82970 282 aaKnown RBP14.69□□□□□ -0.06
CNOT1-220ENST00000569916 GUCY1B3Q02153 619 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 TMEM62Q0P6H9 643 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 IER5Q5VY09 327 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 TRMT1LQ7Z2T5 733 aaKnown RBP14.69□□□□□ -0.06
CNOT1-220ENST00000569916 HAS1Q92839 578 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 APBB2Q92870 758 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 C8orf76Q96K31 380 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 FAM20AQ96MK3 541 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 TRPV2Q9Y5S1 764 aa14.69□□□□□ -0.06
CNOT1-220ENST00000569916 KDM3AQ9Y4C1 1321 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 COL4A6Q14031 1691 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 NLRC5Q86WI3 1866 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-220ENST00000569916 KIF28PB7ZC32 967 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 GJB5O95377 273 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 PPP2R5CQ13362 524 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 TSHZ1Q6ZSZ6 1077 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 IL27Q8NEV9 243 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 CEP131Q9UPN4 1083 aa14.68□□□□□ -0.06
CNOT1-220ENST00000569916 CHD7Q9P2D1 2997 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 LCHNA4D1U4 455 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 M0QZ92 97 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 EML1O00423 815 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 TLL1O43897 1013 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 STBD1O95210 358 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 AMHP03971 560 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 FOSL2P15408 326 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 SPIRE1Q08AE8 756 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 KIAA0319LQ8IZA0 1049 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 MYOCDQ8IZQ8 938 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 NME8Q8N427 588 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 LINC01465Q8N7H1 131 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 FBXO18Q8NFZ0 1043 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 CELF4Q9BZC1 486 aaKnown RBP14.67□□□□□ -0.06
CNOT1-220ENST00000569916 PRDM12Q9H4Q4 367 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 AGO3Q9H9G7 860 aaKnown RBP14.67□□□□□ -0.06
CNOT1-220ENST00000569916 SQORQ9Y6N5 450 aa14.67□□□□□ -0.06
CNOT1-220ENST00000569916 RALGAPA2Q2PPJ7 1873 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 CD52P31358 61 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 TAP1Q03518 808 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 SAFBQ15424 915 aaKnown RBP eCLIP14.66□□□□□ -0.06
CNOT1-220ENST00000569916 TARBP2Q15633 366 aaKnown RBP14.66□□□□□ -0.06
CNOT1-220ENST00000569916 FAM117BQ6P1L5 589 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 FAM184AQ8NB25 1140 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 BANK1Q8NDB2 785 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 TMX3Q96JJ7 454 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 NRBP2Q9NSY0 501 aa14.66□□□□□ -0.06
CNOT1-220ENST00000569916 SEPT9Q9UHD8 586 aaPredicted RBP14.66□□□□□ -0.06
CNOT1-220ENST00000569916 TMEM150BA6NC51 233 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 MAGEB2O15479 319 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 CLCN3P51790 818 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 PSMC5P62195 406 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 XKR3Q5GH77 459 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 SPRED2Q7Z698 418 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 SLFN12Q8IYM2 578 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 METTL13Q8N6R0 699 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 USP38Q8NB14 1042 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 LINC01599Q8WXQ3 324 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 TOP1MTQ969P6 601 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 CEP89Q96ST8 783 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 RAD9AQ99638 391 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 NIFKQ9BYG3 293 aaKnown RBP14.65□□□□□ -0.06
CNOT1-220ENST00000569916 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
CNOT1-220ENST00000569916 CDHR5Q9HBB8 845 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 TTC3P53804 2025 aa14.65□□□□□ -0.06
CNOT1-220ENST00000569916 KIAA1671Q9BY89 1806 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 MARCH6O60337 910 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 NEMFO60524 1076 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 BAG4O95429 457 aaKnown RBP14.64□□□□□ -0.07
CNOT1-220ENST00000569916 VTNP04004 478 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 HTRA4P83105 476 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-220ENST00000569916 ADGRE1Q14246 886 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 CALCRLQ16602 461 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 MTERF2Q49AM1 385 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 NCAPH2Q6IBW4 605 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 EFCAB12Q6NXP0 572 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 ANO5Q75V66 913 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 LRRC71Q8N4P6 559 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 MAFAQ8NHW3 353 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-220ENST00000569916 TMEM40Q8WWA1 233 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 PPP1R16BQ96T49 567 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 GAS2L1Q99501 681 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-220ENST00000569916 BACH2Q9BYV9 841 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 CERS4Q9HA82 394 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 WRAP73Q9P2S5 460 aaPredicted RBP14.64□□□□□ -0.07
CNOT1-220ENST00000569916 PADI3Q9ULW8 664 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 GINS2Q9Y248 185 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 EYSQ5T1H1 3165 aa14.64□□□□□ -0.07
CNOT1-220ENST00000569916 LINC01553A4QN01 128 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 EPOPA6NHQ4 379 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 GPR32O75388 356 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 P4HBP07237 508 aaKnown RBP14.63□□□□□ -0.07
CNOT1-220ENST00000569916 QARSP47897 775 aaKnown RBP14.63□□□□□ -0.07
CNOT1-220ENST00000569916 MCM2P49736 904 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 TBC1D8BQ0IIM8 1120 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 PAK2Q13177 524 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 EPHA7Q15375 998 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms