RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LILRB1Q8NHL6 650 aaPredicted RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 NACC2Q96BF6 587 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 LRGUKQ96M69 825 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 SH3GL1Q99961 368 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 PLEKHA5Q9HAU0 1116 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 INCENPQ9NQS7 918 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 AATFQ9NY61 560 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMG1-217ENST00000569764 CPA4Q9UI42 421 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 SORBS3O60504 671 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 PYGLP06737 847 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 CASTP20810 708 aaKnown RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 STAT3P40763 770 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 SMAD4Q13485 552 aaKnown RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 HYIQ5T013 277 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 NLRP14Q86W24 1093 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 DRAXINQ8NBI3 349 aaPredicted RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 CCDC148Q8NFR7 591 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 ZNF75CPQ92670 426 aaPredicted RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 TEX13BQ9BXU2 312 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 MLXIPQ9HAP2 919 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 PAG1Q9NWQ8 432 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 ANGPTL3Q9Y5C1 460 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 F5H423 210 aaPredicted RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 SSBP05455 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMG1-217ENST00000569764 KRT13P13646 458 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 AKR1A1P14550 325 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 ATP5JP18859 108 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 CPT1AP50416 773 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 PAK2Q13177 524 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 TTLL4Q14679 1199 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 ZYXQ15942 572 aaKnown RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 C11orf91Q3C1V1 193 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 FAM200AQ8TCP9 573 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
SMG1-217ENST00000569764 GIMAP1Q8WWP7 306 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 CCDC68Q9H2F9 335 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 RASSF4Q9H2L5 321 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 STARD7Q9NQZ5 370 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 RRN3Q9NYV6 651 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 HPS5Q9UPZ3 1129 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 ATP11BQ9Y2G3 1177 aa7.29□□□□□ -1.24
SMG1-217ENST00000569764 PTPDC1A2A3K4 754 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 STAG3L1P0CL83 205 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 ZNF24P17028 368 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 HADHAP40939 763 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 CDC42EP1Q00587 391 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 VGLL2Q8N8G2 317 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 MTRQ99707 1265 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 GRPEL1Q9HAV7 217 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 SNTG2Q9NY99 539 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 PRELID1Q9Y255 219 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 STMND1H3BQB6 276 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 GUCA1CO95843 209 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 MRE11P49959 708 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 AK2P54819 239 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
SMG1-217ENST00000569764 KRT222Q8N1A0 295 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 CARNMT1Q8N4J0 409 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 APPBP2Q92624 585 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 EPSTI1Q96J88 318 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 SLC28A3Q9HAS3 691 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 RWDD3Q9Y3V2 267 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 BCORQ6W2J9 1755 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 A6NJY4 79 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 NCK2O43639 380 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 FERP16591 822 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 MXI1P50539 228 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 PPM1NQ8N819 430 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 MAP4K1Q92918 833 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 HAUS7Q99871 368 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 SLF1Q9BQI6 1058 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 NUDT16L1Q9BRJ7 211 aaKnown RBP7.28□□□□□ -1.24
SMG1-217ENST00000569764 C2orf49Q9BVC5 232 aaPredicted RBP7.28□□□□□ -1.24
SMG1-217ENST00000569764 ACAD9Q9H845 621 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 PIH1D1Q9NWS0 290 aaKnown RBP7.28□□□□□ -1.24
SMG1-217ENST00000569764 PCSK1NQ9UHG2 260 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 LAMB2P55268 1798 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 TAF1LQ8IZX4 1826 aa7.28□□□□□ -1.24
SMG1-217ENST00000569764 FAM25EA8MYX2 175 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 MTRF1O75570 445 aaKnown RBP7.27□□□□□ -1.24
SMG1-217ENST00000569764 DESP17661 470 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 CTHP32929 405 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 ACAP1Q15027 740 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 RCN1Q15293 331 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 CRTC2Q53ET0 693 aaPredicted RBP7.27□□□□□ -1.24
SMG1-217ENST00000569764 NBPF12Q5TAG4 269 aaPredicted RBP7.27□□□□□ -1.24
SMG1-217ENST00000569764 PEX5LQ8IYB4 626 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 CCT6BQ92526 530 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 C6orf50Q9HD87 102 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 PGAP2Q9UHJ9 254 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 LIMCH1Q9UPQ0 1083 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 RBM8AQ9Y5S9 174 aaKnown RBP7.27□□□□□ -1.24
SMG1-217ENST00000569764 A0A1B0GUL6 1792 aa7.27□□□□□ -1.24
SMG1-217ENST00000569764 CCDC171Q6TFL3 1326 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 WDFY3Q8IZQ1 3526 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 F8VZ95 297 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 PIK3CDO00329 1044 aa7.27□□□□□ -1.25
SMG1-217ENST00000569764 RNF113AO15541 343 aaKnown RBP7.27□□□□□ -1.25
SMG1-217ENST00000569764 F2P00734 622 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms