RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 CELF4Q9BZC1 486 aaKnown RBP28.54■■■□□ 2.16
CCNF-205ENST00000569093 SFNP31947 248 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 JAK3P52333 1124 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 CCDC85BQ15834 202 aaPredicted RBP28.53■■■□□ 2.16
CCNF-205ENST00000569093 B3GNT9Q6UX72 402 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 TSHZ1Q6ZSZ6 1077 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 MIER3Q7Z3K6 550 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 NME8Q8N427 588 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 CDHR5Q9HBB8 845 aa28.53■■■□□ 2.16
CCNF-205ENST00000569093 LINC01553A4QN01 128 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 M0QZ92 97 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 C22orf31O95567 290 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 KRT2P35908 639 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 HTRA4P83105 476 aaPredicted RBP28.52■■■□□ 2.16
CCNF-205ENST00000569093 CCDC83Q8IWF9 413 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 TNFRSF25Q93038 417 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 INSL6Q9Y581 213 aa28.52■■■□□ 2.16
CCNF-205ENST00000569093 ENPP3O14638 875 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 CCNT1O60563 726 aaKnown RBP28.51■■■□□ 2.15
CCNF-205ENST00000569093 OATP04181 439 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 PRKCEQ02156 737 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 PPP4R3AQ6IN85 833 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 NRBP2Q9NSY0 501 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 MTUS1Q9ULD2 1270 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 GINS2Q9Y248 185 aa28.51■■■□□ 2.15
CCNF-205ENST00000569093 KRT40Q6A162 431 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 METTL13Q8N6R0 699 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 FAM167AQ96KS9 214 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 PPP1R16BQ96T49 567 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 KCNMB3Q9NPA1 279 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 PRDM6Q9NQX0 595 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 PADI3Q9ULW8 664 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 SQORQ9Y6N5 450 aa28.5■■■□□ 2.15
CCNF-205ENST00000569093 KDM3AQ9Y4C1 1321 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 BTBD18B2RXH4 712 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 MMP1P03956 469 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 TMEM266Q2M3C6 531 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 RTN4RL1Q86UN2 441 aaPredicted RBP28.49■■■□□ 2.15
CCNF-205ENST00000569093 RDM1Q8NG50 284 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 BRMS1Q9HCU9 246 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 CEP131Q9UPN4 1083 aa28.49■■■□□ 2.15
CCNF-205ENST00000569093 EML1O00423 815 aa28.48■■■□□ 2.15
CCNF-205ENST00000569093 GCFC2P16383 781 aaKnown RBP28.48■■■□□ 2.15
CCNF-205ENST00000569093 MICALL1Q8N3F8 863 aa28.48■■■□□ 2.15
CCNF-205ENST00000569093 LINC01599Q8WXQ3 324 aa28.48■■■□□ 2.15
CCNF-205ENST00000569093 HAS1Q92839 578 aa28.48■■■□□ 2.15
CCNF-205ENST00000569093 TGS1Q96RS0 853 aaKnown RBP28.48■■■□□ 2.15
CCNF-205ENST00000569093 YME1L1Q96TA2 773 aa28.48■■■□□ 2.15
CCNF-205ENST00000569093 PRRC2BQ5JSZ5 2229 aaKnown RBP28.48■■■□□ 2.15
CCNF-205ENST00000569093 REV3LO60673 3130 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 TMEM150BA6NC51 233 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 VTNP04004 478 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 RBM25P49756 843 aaKnown RBP28.47■■■□□ 2.15
CCNF-205ENST00000569093 CLCN3P51790 818 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 ERVK-21P61565 698 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 GRB10Q13322 594 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 TRIM29Q14134 588 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 EFCAB12Q6NXP0 572 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 POTEDQ86YR6 584 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 DIS3L2Q8IYB7 885 aaKnown RBP28.47■■■□□ 2.15
CCNF-205ENST00000569093 LRRC71Q8N4P6 559 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 BANK1Q8NDB2 785 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 SP7Q8TDD2 431 aaPredicted RBP28.47■■■□□ 2.15
CCNF-205ENST00000569093 TMEM40Q8WWA1 233 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 FAM20AQ96MK3 541 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 C17orf80Q9BSJ5 609 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 VAV3Q9UKW4 847 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 NOC2LQ9Y3T9 749 aaKnown RBP28.47■■■□□ 2.15
CCNF-205ENST00000569093 MTCH2Q9Y6C9 303 aa28.47■■■□□ 2.15
CCNF-205ENST00000569093 MAGEB2O15479 319 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 LPXNO60711 386 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 STBD1O95210 358 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 GUCY1B3Q02153 619 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 PAK2Q13177 524 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 KIZQ2M2Z5 673 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 SH2D3AQ9BRG2 576 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 SUGCTQ9HAC7 445 aa28.46■■■□□ 2.15
CCNF-205ENST00000569093 POU3F3P20264 500 aaPredicted RBP28.45■■■□□ 2.14
CCNF-205ENST00000569093 NFX1Q12986 1120 aaKnown RBP28.45■■■□□ 2.14
CCNF-205ENST00000569093 LINC01465Q8N7H1 131 aa28.45■■■□□ 2.14
CCNF-205ENST00000569093 GDPD5Q8WTR4 605 aa28.45■■■□□ 2.14
CCNF-205ENST00000569093 ZSCAN31Q96LW9 406 aaPredicted RBP28.45■■■□□ 2.14
CCNF-205ENST00000569093 NAP1L4Q99733 375 aaKnown RBP28.45■■■□□ 2.14
CCNF-205ENST00000569093 TMX1Q9H3N1 280 aa28.45■■■□□ 2.14
CCNF-205ENST00000569093 TTC3P53804 2025 aa28.45■■■□□ 2.14
CCNF-205ENST00000569093 COL4A4P53420 1690 aaPredicted RBP28.45■■■□□ 2.14
CCNF-205ENST00000569093 WNT7AO00755 349 aa28.44■■■□□ 2.14
CCNF-205ENST00000569093 MARCH6O60337 910 aa28.44■■■□□ 2.14
CCNF-205ENST00000569093 PPP2R5CQ13362 524 aa28.44■■■□□ 2.14
CCNF-205ENST00000569093 TARBP2Q15633 366 aaKnown RBP28.44■■■□□ 2.14
CCNF-205ENST00000569093 XKR3Q5GH77 459 aa28.44■■■□□ 2.14
CCNF-205ENST00000569093 OSMRQ99650 979 aa28.44■■■□□ 2.14
CCNF-205ENST00000569093 SEPT9Q9UHD8 586 aaPredicted RBP28.44■■■□□ 2.14
CCNF-205ENST00000569093 DDX11L8A8MPP1 907 aa28.43■■■□□ 2.14
CCNF-205ENST00000569093 TBX3O15119 743 aa28.43■■■□□ 2.14
CCNF-205ENST00000569093 GPR32O75388 356 aa28.43■■■□□ 2.14
CCNF-205ENST00000569093 RPS6KA5O75582 802 aa28.43■■■□□ 2.14
CCNF-205ENST00000569093 MTERF2Q49AM1 385 aa28.43■■■□□ 2.14
CCNF-205ENST00000569093 ZNF668Q96K58 619 aaPredicted RBP28.43■■■□□ 2.14
CCNF-205ENST00000569093 LLPHQ9BRT6 129 aaKnown RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms