RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
UBR1-208ENST00000569066 GFOD2Q3B7J2 385 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 SYCP2LQ5T4T6 812 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 PRAMEF9Q5VWM5 478 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 KSR2Q6VAB6 950 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 PEX11GQ96HA9 241 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 TUBGCP5Q96RT8 1024 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 SLC12A5Q9H2X9 1139 aa7.52□□□□□ -1.21
UBR1-208ENST00000569066 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
UBR1-208ENST00000569066 TTBK1Q5TCY1 1321 aaPredicted RBP7.51□□□□□ -1.21
UBR1-208ENST00000569066 AGXTP21549 392 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 AOAHP28039 575 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 MTNR1BP49286 362 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 RHBDL3P58872 404 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 KRT85P78386 507 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBR1-208ENST00000569066 CD276Q5ZPR3 534 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 CXorf57Q6NSI4 855 aaKnown RBP7.51□□□□□ -1.21
UBR1-208ENST00000569066 KCNK18Q7Z418 384 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 FAM26EQ8N5C1 309 aa7.51□□□□□ -1.21
UBR1-208ENST00000569066 PRPF6O94906 941 aaKnown RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 LRG1P02750 347 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 KRT18P05783 430 aaKnown RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 SLC6A3Q01959 620 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 DBPQ10586 325 aaPredicted RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 GRM3Q14832 879 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 RAB3GAP1Q15042 981 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 PHF19Q5T6S3 580 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 DGKHQ86XP1 1220 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 PHYKPLQ8IUZ5 450 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 LYSMD2Q8IV50 215 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 TRIM48Q8IWZ4 208 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 ACAP3Q96P50 834 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 USP36Q9P275 1121 aaKnown RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 TMPRSS11EQ9UL52 423 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 PNMA8BQ9ULN7 279 aaPredicted RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 NUB1Q9Y5A7 615 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GOLGA6CA6NDK9 693 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GOLGA6BA6NDN3 693 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GOLGA6L22H0YM25 854 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GOLGA6DP0CG33 693 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GALEQ14376 348 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 PLEKHN1Q494U1 663 aaPredicted RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 CCSAPQ6IQ19 270 aaPredicted RBP7.5□□□□□ -1.21
UBR1-208ENST00000569066 LRSAM1Q6UWE0 723 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GOLGA6AQ9NYA3 693 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 NUDT5Q9UKK9 219 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 GPR45Q9Y5Y3 372 aa7.5□□□□□ -1.21
UBR1-208ENST00000569066 CAND2O75155 1236 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 MPIG6BO95866 241 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 CELA3BP08861 270 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 RAC2P15153 192 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 ERVFRD-1P60508 538 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 RGL3Q3MIN7 710 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 LILRA2Q8N149 483 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 KCTD10Q9H3F6 313 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 ZNF277Q9NRM2 450 aaPredicted RBP7.49□□□□□ -1.21
UBR1-208ENST00000569066 DPP7Q9UHL4 492 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 YBX2Q9Y2T7 364 aaKnown RBP7.49□□□□□ -1.21
UBR1-208ENST00000569066 NFIBO00712 420 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 UGT8Q16880 541 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 ESPNLQ6ZVH7 1005 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 TTLL11Q8NHH1 800 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 ABHD4Q8TB40 342 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 DTLQ9NZJ0 730 aa7.49□□□□□ -1.21
UBR1-208ENST00000569066 CYP2C19P33261 490 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 PDE6BP35913 854 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 HERVK_113P62684 666 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 TEPPQ6URK8 271 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 AMNQ9BXJ7 453 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 GTPBP4Q9BZE4 634 aaKnown RBP7.48□□□□□ -1.21
UBR1-208ENST00000569066 PDGFDQ9GZP0 370 aaPredicted RBP7.48□□□□□ -1.21
UBR1-208ENST00000569066 KLHL14Q9P2G3 628 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 SAP30BPQ9UHR5 308 aaKnown RBP7.48□□□□□ -1.21
UBR1-208ENST00000569066 AP1G1O43747 822 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 NDUFS2O75306 463 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 PCDH8O95206 1070 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 LGALS4P56470 323 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 CDK17Q00537 523 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 MINDY4Q4G0A6 757 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 RRP12Q5JTH9 1297 aaKnown RBP7.48□□□□□ -1.21
UBR1-208ENST00000569066 TTC38Q5R3I4 469 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 IFIT1BQ5T764 474 aaKnown RBP7.48□□□□□ -1.21
UBR1-208ENST00000569066 B3GNT9Q6UX72 402 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 PROSER1Q86XN7 944 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 CCAR1Q8IX12 1150 aaKnown RBP7.48□□□□□ -1.21
UBR1-208ENST00000569066 FERMT2Q96AC1 680 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 ARHGAP28Q9P2N2 729 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 ASB1Q9Y576 335 aa7.48□□□□□ -1.21
UBR1-208ENST00000569066 MC3RP41968 323 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 CR1LQ2VPA4 569 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 SLFN12LQ6IEE8 588 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 LIPIQ6XZB0 460 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 SLC39A13Q96H72 371 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 CCDC120Q96HB5 630 aa7.47□□□□□ -1.21
UBR1-208ENST00000569066 INTS4Q96HW7 963 aaKnown RBP7.47□□□□□ -1.21
UBR1-208ENST00000569066 MPHOSPH6Q99547 160 aaKnown RBP7.47□□□□□ -1.21
UBR1-208ENST00000569066 PCMTD2Q9NV79 361 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms