RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 IGF2-ASQ6U949 168 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 LBX2Q6XYB7 198 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 MB21D1Q8N884 522 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 REPS2Q8NFH8 660 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 OR13H1Q8NG92 308 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 WASF1Q92558 559 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 SPACA7Q96KW9 195 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 IPO9Q96P70 1041 aaKnown RBP8.89□□□□□ -0.99
SMG1-214ENST00000568038 AMNQ9BXJ7 453 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 ZCCHC17Q9NP64 241 aaKnown RBP8.89□□□□□ -0.99
SMG1-214ENST00000568038 HOMER2Q9NSB8 354 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 VPS54Q9P1Q0 977 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 CPA4Q9UI42 421 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 PCDHA1Q9Y5I3 950 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 RLFQ13129 1914 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 STXBP3O00186 592 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 TRPA1O75762 1119 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 TBC1D8O95759 1140 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 NOS3P29474 1203 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 STAT3P40763 770 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 GCLCP48506 637 aaPredicted RBP8.88□□□□□ -0.99
SMG1-214ENST00000568038 NAPAP54920 295 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 NLRP5P59047 1200 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 CRHR2Q13324 411 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 SNRNP48Q6IEG0 339 aaKnown RBP8.88□□□□□ -0.99
SMG1-214ENST00000568038 GTF3C2Q8WUA4 911 aaPredicted RBP8.88□□□□□ -0.99
SMG1-214ENST00000568038 C8orf76Q96K31 380 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 LACRTQ9GZZ8 138 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 SPATC1LQ9H0A9 340 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 R3HDMLQ9H3Y0 253 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 GJB4Q9NTQ9 266 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 RNF186Q9NXI6 227 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 ZNF214Q9UL59 606 aaPredicted RBP8.88□□□□□ -0.99
SMG1-214ENST00000568038 RABGAP1Q9Y3P9 1069 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 PARP14Q460N5 1801 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 MYH6P13533 1939 aa8.88□□□□□ -0.99
SMG1-214ENST00000568038 COL11A1P12107 1806 aaPredicted RBP8.87□□□□□ -0.99
SMG1-214ENST00000568038 ATP2A1O14983 1001 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 TLR2O60603 784 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 ALX3O95076 343 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 XBP1P17861 261 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 CDC25BP30305 580 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 OAZ1P54368 228 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 ERVK-24P63145 666 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 ATP11AP98196 1134 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 TRIM29Q14134 588 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 MUM1L1Q5H9M0 696 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 WDR78Q5VTH9 848 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
SMG1-214ENST00000568038 CEP135Q66GS9 1140 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 NCAPG2Q86XI2 1143 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 RIOX2Q8IUF8 465 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 GPRC5AQ8NFJ5 357 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 SHISA4Q96DD7 197 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 MOV10L1Q9BXT6 1211 aaKnown RBP8.87□□□□□ -0.99
SMG1-214ENST00000568038 TEX13BQ9BXU2 312 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 CWC22Q9HCG8 908 aaKnown RBP8.87□□□□□ -0.99
SMG1-214ENST00000568038 RNF146Q9NTX7 359 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 BARHL2Q9NY43 387 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 KCNJ14Q9UNX9 436 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 MRPL11Q9Y3B7 192 aaKnown RBP8.87□□□□□ -0.99
SMG1-214ENST00000568038 SMCHD1A6NHR9 2005 aa8.87□□□□□ -0.99
SMG1-214ENST00000568038 ABCB11O95342 1321 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 ADGRA2Q96PE1 1338 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 SMCO2A6NFE2 343 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 H3BQV1 296 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 hCG_1984214I3L0E3 225 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 DLL1O00548 723 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 NFIBO00712 420 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 H2AFB2P0C5Z0 115 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 HOXD8P13378 290 aaPredicted RBP8.86□□□□□ -0.99
SMG1-214ENST00000568038 ERCC3P19447 782 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 SYT1P21579 422 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 CCNA1P78396 465 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 TRAF1Q13077 416 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 TKFCQ3LXA3 575 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 KRT40Q6A162 431 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 C17orf99Q6UX52 265 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 NSMFQ6X4W1 530 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 CCAR1Q8IX12 1150 aaKnown RBP8.86□□□□□ -0.99
SMG1-214ENST00000568038 DNAJC5GQ8N7S2 189 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 ZNF713Q8N859 430 aaPredicted RBP8.86□□□□□ -0.99
SMG1-214ENST00000568038 CCDC148Q8NFR7 591 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 CCDC12Q8WUD4 166 aaPredicted RBP8.86□□□□□ -0.99
SMG1-214ENST00000568038 TBC1D5Q92609 795 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 PORCNQ9H237 461 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 SH3GLB2Q9NR46 395 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 ABI2Q9NYB9 513 aaPredicted RBP8.86□□□□□ -0.99
SMG1-214ENST00000568038 MORF4L1Q9UBU8 362 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 PNMA2Q9UL42 364 aa8.86□□□□□ -0.99
SMG1-214ENST00000568038 VPS37CA5D8V6 355 aaPredicted RBP8.85□□□□□ -0.99
SMG1-214ENST00000568038 LINC01387J3KSC0 135 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 ADAMTS3O15072 1205 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 SLC25A27O95847 323 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 CFBP00751 764 aa8.85□□□□□ -0.99
SMG1-214ENST00000568038 PDCP20941 246 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms