RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 PRLP01236 227 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 CHGBP05060 677 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 IL2P60568 153 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 PHC1P78364 1004 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 ALDH6A1Q02252 535 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 TERF2Q15554 542 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 TTLL7Q6ZT98 887 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 SIAH1Q8IUQ4 282 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 MARCH10Q8NA82 808 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 SYT8Q8NBV8 401 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 HIPK4Q8NE63 616 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 ADAMTS17Q8TE56 1095 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 RTF1Q92541 710 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 ERCC4Q92889 916 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 MBD6Q96DN6 1003 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 ZNF496Q96IT1 587 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 KCNC2Q96PR1 638 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 BTBD2Q9BX70 525 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 IFT22Q9H7X7 185 aa5.52□□□□□ -1.53
HERPUD1-212ENST00000567944 ZEB2O60315 1214 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 NOBOXO60393 691 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 BUD31P41223 144 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 NFKB2Q00653 900 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 LRRC32Q14392 662 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 STAT4Q14765 748 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 MYBPC3Q14896 1274 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 GPR158Q5T848 1215 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 RNF187Q5TA31 235 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 MCTP2Q6DN12 878 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 TXNDC5Q8NBS9 432 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 ZSCAN18Q8TBC5 510 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 USP7Q93009 1102 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 WRNIP1Q96S55 665 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 FOXB1Q99853 325 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
HERPUD1-212ENST00000567944 B8ZZF3 427 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 RGS3P49796 1198 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 CD83Q01151 205 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 SLC6A3Q01959 620 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 MOGSQ13724 837 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 SART3Q15020 963 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 ATP13A4Q4VNC1 1196 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 FAM26FQ5R3K3 315 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 BROXQ5VW32 411 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 TRMT10BQ6PF06 316 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 UNQ6494/PRO21346Q6UXR6 183 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 KANSL1Q7Z3B3 1105 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 DDX42Q86XP3 938 aaKnown RBP eCLIP5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 BCL6BQ8N143 479 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 ZNF610Q8N9Z0 462 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 MAML3Q96JK9 1138 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 TTC1Q99614 292 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 OR10A5Q9H207 317 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 VTA1Q9NP79 307 aa5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 LUC7LQ9NQ29 371 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-212ENST00000567944 ADAMTS20P59510 1910 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 ELL2O00472 640 aaPredicted RBP5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 GPR39O43194 453 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 CYP7B1O75881 506 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 FBXO21O94952 628 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 CNGA1P29973 690 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 OCRLQ01968 901 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 TOP3AQ13472 1001 aaPredicted RBP5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 RGL3Q3MIN7 710 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 CT47A1Q5JQC4 288 aaPredicted RBP5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 CXXC5Q7LFL8 322 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 CLRN3Q8NCR9 226 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 SLC5A5Q92911 643 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 KATNBL1Q9H079 304 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 XYLT2Q9H1B5 865 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 POFUT1Q9H488 388 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 ATP8A1Q9Y2Q0 1164 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 PHLDB1Q86UU1 1377 aa5.49□□□□□ -1.53
HERPUD1-212ENST00000567944 UBA6A0AVT1 1052 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 H0Y858 1186 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 BRINP1O60477 761 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 MAFO75444 373 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 BMP7P18075 431 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 CANXP27824 592 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 KCNC1P48547 511 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 CDKN1CP49918 316 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 NOLC1Q14978 699 aaKnown RBP eCLIP5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 PDCD1Q15116 288 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 TTC38Q5R3I4 469 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 ZBTB41Q5SVQ8 909 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 NME9Q86XW9 330 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 FEZF2Q8TBJ5 459 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 L2HGDHQ9H9P8 463 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 PCDH12Q9NPG4 1184 aa5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 APOBEC2Q9Y235 224 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-212ENST00000567944 ANKRD62A6NC57 917 aa5.47□□□□□ -1.53
HERPUD1-212ENST00000567944 C9orf118A6NHY6 69 aa5.47□□□□□ -1.53
HERPUD1-212ENST00000567944 PRPF6O94906 941 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-212ENST00000567944 CD40P25942 277 aa5.47□□□□□ -1.53
HERPUD1-212ENST00000567944 APEX1P27695 318 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-212ENST00000567944 POLD1P28340 1107 aa5.47□□□□□ -1.53
HERPUD1-212ENST00000567944 LSP1P33241 339 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms