RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 DDX25Q9UHL0 483 aaKnown RBP28.41■■■□□ 2.14
FANCA-228ENST00000567943 SAMM50Q9Y512 469 aa28.41■■■□□ 2.14
FANCA-228ENST00000567943 PRRC2BQ5JSZ5 2229 aaKnown RBP28.41■■■□□ 2.14
FANCA-228ENST00000567943 FAM205CA6NFA0 338 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 CHMP2AO43633 222 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 AMHP03971 560 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 HTRA4P83105 476 aaPredicted RBP28.4■■■□□ 2.14
FANCA-228ENST00000567943 ZNF484Q5JVG2 852 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 TRMT1LQ7Z2T5 733 aaKnown RBP28.4■■■□□ 2.14
FANCA-228ENST00000567943 KIAA0319LQ8IZA0 1049 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 TNFRSF25Q93038 417 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 TOP1MTQ969P6 601 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 TEKT3Q9BXF9 490 aa28.4■■■□□ 2.14
FANCA-228ENST00000567943 COL4A4P53420 1690 aaPredicted RBP28.39■■■□□ 2.14
FANCA-228ENST00000567943 C22orf31O95567 290 aa28.39■■■□□ 2.14
FANCA-228ENST00000567943 RPLP2P05387 115 aaKnown RBP28.39■■■□□ 2.14
FANCA-228ENST00000567943 TTC3P53804 2025 aa28.39■■■□□ 2.14
FANCA-228ENST00000567943 IER5Q5VY09 327 aa28.39■■■□□ 2.14
FANCA-228ENST00000567943 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.39■■■□□ 2.14
FANCA-228ENST00000567943 CKAP2LQ8IYA6 745 aa28.39■■■□□ 2.14
FANCA-228ENST00000567943 DIS3L2Q8IYB7 885 aaKnown RBP28.39■■■□□ 2.14
FANCA-228ENST00000567943 TRPV2Q9Y5S1 764 aa28.39■■■□□ 2.14
FANCA-228ENST00000567943 BTBD18B2RXH4 712 aa28.38■■■□□ 2.13
FANCA-228ENST00000567943 GUCY1B3Q02153 619 aa28.38■■■□□ 2.13
FANCA-228ENST00000567943 TSHZ1Q6ZSZ6 1077 aa28.38■■■□□ 2.13
FANCA-228ENST00000567943 ARNTL2Q8WYA1 636 aa28.38■■■□□ 2.13
FANCA-228ENST00000567943 LINC01553A4QN01 128 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 CCNT1O60563 726 aaKnown RBP28.37■■■□□ 2.13
FANCA-228ENST00000567943 IGFBP4P22692 258 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 CD52P31358 61 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 HMGN5P82970 282 aaKnown RBP28.37■■■□□ 2.13
FANCA-228ENST00000567943 PPP4R3AQ6IN85 833 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 NME8Q8N427 588 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 LINC01599Q8WXQ3 324 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 C8orf76Q96K31 380 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 CELF4Q9BZC1 486 aaKnown RBP28.37■■■□□ 2.13
FANCA-228ENST00000567943 CDHR5Q9HBB8 845 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 KCNMB3Q9NPA1 279 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 SQORQ9Y6N5 450 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 KDM3AQ9Y4C1 1321 aa28.37■■■□□ 2.13
FANCA-228ENST00000567943 LPXNO60711 386 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 CD2BP2O95400 341 aaKnown RBP28.36■■■□□ 2.13
FANCA-228ENST00000567943 GCFC2P16383 781 aaKnown RBP28.36■■■□□ 2.13
FANCA-228ENST00000567943 SFNP31947 248 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 JAK3P52333 1124 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 FAM184AQ8NB25 1140 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 IL27Q8NEV9 243 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 SP7Q8TDD2 431 aaPredicted RBP28.36■■■□□ 2.13
FANCA-228ENST00000567943 NAP1L4Q99733 375 aaKnown RBP28.36■■■□□ 2.13
FANCA-228ENST00000567943 BACH2Q9BYV9 841 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 INSL6Q9Y581 213 aa28.36■■■□□ 2.13
FANCA-228ENST00000567943 ENPP3O14638 875 aa28.35■■■□□ 2.13
FANCA-228ENST00000567943 UPP2O95045 317 aa28.35■■■□□ 2.13
FANCA-228ENST00000567943 STBD1O95210 358 aa28.35■■■□□ 2.13
FANCA-228ENST00000567943 PRKCEQ02156 737 aa28.35■■■□□ 2.13
FANCA-228ENST00000567943 RTN4RL1Q86UN2 441 aaPredicted RBP28.35■■■□□ 2.13
FANCA-228ENST00000567943 PRDM6Q9NQX0 595 aa28.35■■■□□ 2.13
FANCA-228ENST00000567943 OATP04181 439 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 POU3F3P20264 500 aaPredicted RBP28.34■■■□□ 2.13
FANCA-228ENST00000567943 ERVK-21P61565 698 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 SAFBQ15424 915 aaKnown RBP eCLIP28.34■■■□□ 2.13
FANCA-228ENST00000567943 MIER3Q7Z3K6 550 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 LINC01465Q8N7H1 131 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 RDM1Q8NG50 284 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 PPM1EQ8WY54 764 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 HAS1Q92839 578 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 FAM167AQ96KS9 214 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 VAV3Q9UKW4 847 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 PADI3Q9ULW8 664 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 MTCH2Q9Y6C9 303 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 COL4A6Q14031 1691 aa28.34■■■□□ 2.13
FANCA-228ENST00000567943 EML1O00423 815 aa28.33■■■□□ 2.13
FANCA-228ENST00000567943 CCDC85BQ15834 202 aaPredicted RBP28.33■■■□□ 2.13
FANCA-228ENST00000567943 TMEM40Q8WWA1 233 aa28.33■■■□□ 2.13
FANCA-228ENST00000567943 TMX3Q96JJ7 454 aa28.33■■■□□ 2.13
FANCA-228ENST00000567943 TMX1Q9H3N1 280 aa28.33■■■□□ 2.13
FANCA-228ENST00000567943 NLRC5Q86WI3 1866 aa28.33■■■□□ 2.13
FANCA-228ENST00000567943 CUL9Q8IWT3 2517 aa28.33■■■□□ 2.13
FANCA-228ENST00000567943 M0QZ92 97 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 GRB10Q13322 594 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 TMEM266Q2M3C6 531 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 POTEDQ86YR6 584 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 CRIPAKQ8N1N5 446 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 SUGCTQ9HAC7 445 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 MTUS1Q9ULD2 1270 aa28.32■■■□□ 2.12
FANCA-228ENST00000567943 TMEM150BA6NC51 233 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 WNT7AO00755 349 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 GPR32O75388 356 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 PPP2R5CQ13362 524 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 TARBP2Q15633 366 aaKnown RBP28.31■■■□□ 2.12
FANCA-228ENST00000567943 METTL13Q8N6R0 699 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 FAM20AQ96MK3 541 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 TGS1Q96RS0 853 aaKnown RBP28.31■■■□□ 2.12
FANCA-228ENST00000567943 CEP89Q96ST8 783 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 C17orf80Q9BSJ5 609 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 CEP131Q9UPN4 1083 aa28.31■■■□□ 2.12
FANCA-228ENST00000567943 MARCH6O60337 910 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 VTNP04004 478 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 MCM2P49736 904 aa28.3■■■□□ 2.12
FANCA-228ENST00000567943 CLCN3P51790 818 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms