RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 GATMP50440 423 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 PTPN5P54829 565 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
FANCA-227ENST00000567883 PPP1R18Q6NYC8 613 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 TMEM184AQ6ZMB5 413 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 SLC24A5Q71RS6 500 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 HEATR3Q7Z4Q2 680 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
FANCA-227ENST00000567883 SGMS1Q86VZ5 419 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 PRSS33Q8NF86 280 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 SUSD6Q92537 303 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
FANCA-227ENST00000567883 ERVK-5Q9HDB9 667 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 TLR9Q9NR96 1032 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 RGS18Q9NS28 235 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
FANCA-227ENST00000567883 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 COL1A2P08123 1366 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 KMT2EQ8IZD2 1858 aa12.63□□□□□ -0.39
FANCA-227ENST00000567883 MYH9P35579 1960 aaKnown RBP12.63□□□□□ -0.39
FANCA-227ENST00000567883 C9IYK1 514 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 MGEA5O60502 916 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 FGF18O76093 207 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 FAM189BP81408 668 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 ITGB3BPQ13352 177 aaPredicted RBP12.62□□□□□ -0.39
FANCA-227ENST00000567883 DUSP6Q16828 381 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 ABHD15Q6UXT9 468 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 NIPA1Q7RTP0 329 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
FANCA-227ENST00000567883 KIAA0319LQ8IZA0 1049 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 FBXL6Q8N531 539 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 RASGRP4Q8TDF6 673 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 MICAL1Q8TDZ2 1067 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 ADAM2Q99965 735 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 LZTS1Q9Y250 596 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 NOC2LQ9Y3T9 749 aaKnown RBP12.62□□□□□ -0.39
FANCA-227ENST00000567883 PCDHGC5Q9Y5F6 944 aa12.62□□□□□ -0.39
FANCA-227ENST00000567883 SPTBN4Q9H254 2564 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 DENND3A2RUS2 1198 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 TBKBP1A7MCY6 615 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 FSCN2O14926 492 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 SLC27A2O14975 620 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 GPR182O15218 404 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 SREBF1P36956 1147 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 NAPAP54920 295 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 ERVFC1P60507 584 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 SIGLEC14Q08ET2 396 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 KCNC3Q14003 757 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 COL9A3Q14050 684 aaPredicted RBP12.61□□□□□ -0.39
FANCA-227ENST00000567883 NECTIN1Q15223 517 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 ZNF484Q5JVG2 852 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 SPOUT1Q5T280 376 aaKnown RBP12.61□□□□□ -0.39
FANCA-227ENST00000567883 FAM102BQ5T8I3 360 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 IER5LQ5T953 404 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 FAM160B1Q5W0V3 765 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
FANCA-227ENST00000567883 TMEM40Q8WWA1 233 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 NEK1Q96PY6 1258 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 ANO3Q9BYT9 981 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
FANCA-227ENST00000567883 GLT8D2Q9H1C3 349 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 ELAC1Q9H777 363 aaKnown RBP12.61□□□□□ -0.39
FANCA-227ENST00000567883 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 RBM28Q9NW13 759 aaKnown RBP12.61□□□□□ -0.39
FANCA-227ENST00000567883 TMEM161AQ9NX61 479 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 ST3GAL5Q9UNP4 418 aa12.61□□□□□ -0.39
FANCA-227ENST00000567883 PER2O15055 1255 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 CCNE2O96020 404 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 CRYBB1P53674 252 aaPredicted RBP12.6□□□□□ -0.39
FANCA-227ENST00000567883 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 AP3B2Q13367 1082 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 COLGALT1Q8NBJ5 622 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 RPGRIP1Q96KN7 1286 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 S1PR5Q9H228 398 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 CWH43Q9H720 699 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 TYW1Q9NV66 732 aaKnown RBP12.6□□□□□ -0.39
FANCA-227ENST00000567883 TMEM260Q9NX78 707 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 GINS2Q9Y248 185 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 WDR81Q562E7 1941 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 MYO10Q9HD67 2058 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 CNTNAP5Q8WYK1 1306 aa12.6□□□□□ -0.39
FANCA-227ENST00000567883 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
FANCA-227ENST00000567883 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
FANCA-227ENST00000567883 BACH1O14867 736 aa12.59□□□□□ -0.39
FANCA-227ENST00000567883 DHX15O43143 795 aaKnown RBP12.59□□□□□ -0.39
FANCA-227ENST00000567883 SRGAP2BP0DMP2 458 aa12.59□□□□□ -0.39
FANCA-227ENST00000567883 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
FANCA-227ENST00000567883 LAG3P18627 525 aa12.59□□□□□ -0.39
FANCA-227ENST00000567883 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms