RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ZBTB42	B2RXF5	422 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	MAGEB2	O15479	319 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	PSMD10	O75832	226 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	CD52	P31358	61 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	SFN	P31947	248 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	FXR2	P51116	673 aa	Known RBP eCLIP	7.81	□□□□□ -1.16	5e-8	■■■■□ 19.4
SF3B3-209	ENST00000567635	JAK3	P52333	1124 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	TMEM62	Q0P6H9	643 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	GRB10	Q13322	594 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	ME3	Q16798	604 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	INF2	Q27J81	1249 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	LRCH2	Q5VUJ6	765 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	MOXD1	Q6UVY6	613 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	FAM43B	Q6ZT52	329 aa	Predicted RBP	7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	TRMT1L	Q7Z2T5	733 aa	Known RBP	7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	KIAA0319L	Q8IZA0	1049 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	NECAB1	Q8N987	351 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	SP7	Q8TDD2	431 aa	Predicted RBP	7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	FAM167A	Q96KS9	214 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	MBOAT7	Q96N66	472 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	YME1L1	Q96TA2	773 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	TEKT3	Q9BXF9	490 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	UNC45A	Q9H3U1	944 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	AGO3	Q9H9G7	860 aa	Known RBP	7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	PRDM6	Q9NQX0	595 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	LMCD1	Q9NZU5	365 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	TRPV2	Q9Y5S1	764 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	MTCH2	Q9Y6C9	303 aa		7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	7.81	□□□□□ -1.16
SF3B3-209	ENST00000567635	IGSF9B	Q9UPX0	1349 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	KDM3A	Q9Y4C1	1321 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	DTNB	O60941	627 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	TDP2	O95551	362 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	C22orf31	O95567	290 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	FDPS	P14324	419 aa	Known RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	GCFC2	P16383	781 aa	Known RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	MRPS5	P82675	430 aa	Known RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	LETM2	Q2VYF4	491 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	ODR4	Q5SWX8	454 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	KRT40	Q6A162	431 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	EFCAB12	Q6NXP0	572 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	MIER3	Q7Z3K6	550 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	SPRED2	Q7Z698	418 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	RTN4RL1	Q86UN2	441 aa	Predicted RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	MICALL1	Q8N3F8	863 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	METTL13	Q8N6R0	699 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	FBXO22	Q8NEZ5	403 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	RDM1	Q8NG50	284 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	ATXN2L	Q8WWM7	1075 aa	Known RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	GTF3C6	Q969F1	213 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	GJA10	Q969M2	543 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	FAM20A	Q96MK3	541 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	NAP1L4	Q99733	375 aa	Known RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	FTHL17	Q9BXU8	183 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	SUGCT	Q9HAC7	445 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	CDHR5	Q9HBB8	845 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	GJB4	Q9NTQ9	266 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	DDX25	Q9UHL0	483 aa	Known RBP	7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	MTUS1	Q9ULD2	1270 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	PADI3	Q9ULW8	664 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	CEP131	Q9UPN4	1083 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	LIMCH1	Q9UPQ0	1083 aa		7.8	□□□□□ -1.16
SF3B3-209	ENST00000567635	CHMP2A	O43633	222 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	ZNF862	O60290	1169 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	MARCH6	O60337	910 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	LPXN	O60711	386 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	LARGE1	O95461	756 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	OAT	P04181	439 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	TMOD1	P28289	359 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	CRYBB1	P53674	252 aa	Predicted RBP	7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	PAK2	Q13177	524 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	XKR3	Q5GH77	459 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	PPP4R3A	Q6IN85	833 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	PIK3AP1	Q6ZUJ8	805 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	NEK8	Q86SG6	692 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	TMEM192	Q8IY95	271 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	ZNF710	Q8N1W2	664 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	FIBCD1	Q8N539	461 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	NSUN7	Q8NE18	718 aa	Known RBP	7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	ETNPPL	Q8TBG4	499 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	OXER1	Q8TDS5	423 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	GDPD5	Q8WTR4	605 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	SYMPK	Q92797	1274 aa	Known RBP	7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	SAMD11	Q96NU1	681 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	C17orf80	Q9BSJ5	609 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	NIFK	Q9BYG3	293 aa	Known RBP	7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	BRMS1	Q9HCU9	246 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	GINS2	Q9Y248	185 aa		7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	COL4A4	P53420	1690 aa	Predicted RBP	7.79	□□□□□ -1.16
SF3B3-209	ENST00000567635	DDX11L8	A8MPP1	907 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	TBX3	O15119	743 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	GPR182	O15218	404 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	SLC37A4	O43826	429 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	CCNT1	O60563	726 aa	Known RBP	7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	GPR32	O75388	356 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	RPS6KA5	O75582	802 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	DGKI	O75912	1065 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	STBD1	O95210	358 aa		7.78	□□□□□ -1.16
SF3B3-209	ENST00000567635	BAG4	O95429	457 aa	Known RBP	7.78	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms