RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SWSAP1Q6NVH7 229 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 NEK9Q8TD19 979 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 MAP7D2Q96T17 732 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 AGXT2Q9BYV1 514 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 AGO3Q9H9G7 860 aaKnown RBP21.08■□□□□ 0.97
LINC01238-205ENST00000567549 RC3H2Q9HBD1 1191 aaKnown RBP21.08■□□□□ 0.97
LINC01238-205ENST00000567549 PRKAG3Q9UGI9 489 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 HCN4Q9Y3Q4 1203 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 PCDHB7Q9Y5E2 793 aa21.08■□□□□ 0.97
LINC01238-205ENST00000567549 IGLV3-22A0A075B6J6 115 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 WDR64B1ANS9 1081 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 CPLX1O14810 134 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 CCNE2O96020 404 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 MMP1P03956 469 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 IFNAR1P17181 557 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 SARSP49591 514 aaKnown RBP21.07■□□□□ 0.96
LINC01238-205ENST00000567549 TMEM62Q0P6H9 643 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 CSPP1Q1MSJ5 1256 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 PRR16Q569H4 304 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 TMEM31Q5JXX7 168 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 CCDC60Q8IWA6 550 aaPredicted RBP21.07■□□□□ 0.96
LINC01238-205ENST00000567549 FAM178BQ8IXR5 827 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 GJD3Q8N144 294 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 TRAPPC12Q8WVT3 735 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 CRYGNQ8WXF5 182 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 POP1Q99575 1024 aaKnown RBP21.07■□□□□ 0.96
LINC01238-205ENST00000567549 CLDND1Q9NY35 253 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 GINS2Q9Y248 185 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 MAFBQ9Y5Q3 323 aaPredicted RBP21.07■□□□□ 0.96
LINC01238-205ENST00000567549 LOXHD1Q8IVV2 1947 aa21.07■□□□□ 0.96
LINC01238-205ENST00000567549 XIRP2A4UGR9 3374 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 GRXCR2A6NFK2 248 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 ALADP13716 330 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 SFNP31947 248 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 CIITAP33076 1130 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 USP11P51784 963 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 COL19A1Q14993 1142 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.06■□□□□ 0.96
LINC01238-205ENST00000567549 SLC26A6Q9BXS9 759 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 NRBP2Q9NSY0 501 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 ARIH1Q9Y4X5 557 aaPredicted RBP21.06■□□□□ 0.96
LINC01238-205ENST00000567549 PCDHB12Q9Y5F1 795 aa21.06■□□□□ 0.96
LINC01238-205ENST00000567549 DHX15O43143 795 aaKnown RBP21.05■□□□□ 0.96
LINC01238-205ENST00000567549 HOXA2O43364 376 aa21.05■□□□□ 0.96
LINC01238-205ENST00000567549 CRYBB1P53674 252 aaPredicted RBP21.05■□□□□ 0.96
LINC01238-205ENST00000567549 NLRP5P59047 1200 aa21.05■□□□□ 0.96
LINC01238-205ENST00000567549 SLC24A5Q71RS6 500 aa21.05■□□□□ 0.96
LINC01238-205ENST00000567549 RIT2Q99578 217 aa21.05■□□□□ 0.96
LINC01238-205ENST00000567549 UPF3BQ9BZI7 483 aaKnown RBP21.05■□□□□ 0.96
LINC01238-205ENST00000567549 CYP46A1Q9Y6A2 500 aa21.05■□□□□ 0.96
LINC01238-205ENST00000567549 EVPLQ92817 2033 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 JAK3P52333 1124 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 EVCP57679 992 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 CDC42EP1Q00587 391 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 UBE3AQ05086 875 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 PKN1Q16512 942 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 SPOUT1Q5T280 376 aaKnown RBP21.04■□□□□ 0.96
LINC01238-205ENST00000567549 GALNT17Q6IS24 598 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 RUFY3Q7L099 469 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 KIAA0319LQ8IZA0 1049 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 METTL13Q8N6R0 699 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 PHKBQ93100 1093 aa21.04■□□□□ 0.96
LINC01238-205ENST00000567549 PI4K2BG5E9Z4 385 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 H3BQ06 376 aaPredicted RBP21.03■□□□□ 0.96
LINC01238-205ENST00000567549 GRM6O15303 877 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 GAS7O60861 476 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 GPR37L1O60883 481 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 CPA1P15085 419 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 SSRP1Q08945 709 aaKnown RBP21.03■□□□□ 0.96
LINC01238-205ENST00000567549 RDM1Q8NG50 284 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 TEKT3Q9BXF9 490 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 ERVK-5Q9HDB9 667 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 RGS18Q9NS28 235 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 GABBR1Q9UBS5 961 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 PLAGL2Q9UPG8 496 aa21.03■□□□□ 0.96
LINC01238-205ENST00000567549 MRPL42Q9Y6G3 142 aaKnown RBP21.03■□□□□ 0.96
LINC01238-205ENST00000567549 C22orf31O95567 290 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 ZSCAN20P17040 1043 aaPredicted RBP21.02■□□□□ 0.96
LINC01238-205ENST00000567549 PDIA3P30101 505 aaKnown RBP21.02■□□□□ 0.96
LINC01238-205ENST00000567549 PDE12Q6L8Q7 609 aaKnown RBP21.02■□□□□ 0.96
LINC01238-205ENST00000567549 SKAP1Q86WV1 359 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 LINC01599Q8WXQ3 324 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 ZBTB10Q96DT7 871 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 ADAM2Q99965 735 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 ELAC1Q9H777 363 aaKnown RBP21.02■□□□□ 0.96
LINC01238-205ENST00000567549 ATP6V0A4Q9HBG4 840 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 DISC1Q9NRI5 854 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 PPP4R2Q9NY27 417 aa21.02■□□□□ 0.96
LINC01238-205ENST00000567549 CDKL5O76039 1030 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 DEXIO95424 95 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 SRGAP2BP0DMP2 458 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 IL9P15248 144 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 XBP1P17861 261 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 TMEM266Q2M3C6 531 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 PAN2Q504Q3 1202 aaKnown RBP21.01■□□□□ 0.95
LINC01238-205ENST00000567549 RTN4RL1Q86UN2 441 aaPredicted RBP21.01■□□□□ 0.95
LINC01238-205ENST00000567549 CRIPAKQ8N1N5 446 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 RSPH1Q8WYR4 309 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 FAM122AQ96E09 287 aa21.01■□□□□ 0.95
LINC01238-205ENST00000567549 ZNF274Q96GC6 653 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms