RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 NELFCDQ8IXH7 590 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 NEDD1Q8NHV4 660 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 MDM1Q8TC05 714 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.32
COMMD4-215ENST00000566843 PGM2Q96G03 612 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 NOD2Q9HC29 1040 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 ZNF652Q9Y2D9 606 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-215ENST00000566843 CETN3O15182 167 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 CAND2O75155 1236 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 H2AFZP0C0S5 128 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 SLC9A1P19634 815 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 EPS15P42566 896 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 MMP13P45452 471 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 NOVP48745 357 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 ADCY7P51828 1080 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 CRELD2Q6UXH1 353 aaPredicted RBP17.07■□□□□ 0.32
COMMD4-215ENST00000566843 H2AFVQ71UI9 128 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 FRMD5Q7Z6J6 570 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
COMMD4-215ENST00000566843 CELF4Q9BZC1 486 aaKnown RBP17.07■□□□□ 0.32
COMMD4-215ENST00000566843 CCDC134Q9H6E4 229 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
COMMD4-215ENST00000566843 CTNND1O60716 968 aaKnown RBP17.06■□□□□ 0.32
COMMD4-215ENST00000566843 E2F5Q15329 346 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
COMMD4-215ENST00000566843 HAS1Q92839 578 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 CUL5Q93034 780 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 SPAG5Q96R06 1193 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 FMO2Q99518 471 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 RAB17Q9H0T7 212 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 EMILIN3Q9NT22 766 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 ZDHHC18Q9NUE0 388 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
COMMD4-215ENST00000566843 KDM3AQ9Y4C1 1321 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
COMMD4-215ENST00000566843 FRMD3A2A2Y4 597 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 SLC26A4O43511 780 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 ATP2C2O75185 946 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 PON1P27169 355 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 JAM2P57087 298 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 PPP2R5EQ16537 467 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 DUPD1Q68J44 220 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 CLEC4GQ6UXB4 293 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 NT5C3AQ9H0P0 336 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 DPH5Q9H2P9 285 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 ADAM7Q9H2U9 754 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 RTN2O75298 545 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
COMMD4-215ENST00000566843 CHN1P15882 459 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 PTENP60484 403 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 C16orf86Q6ZW13 317 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 ANKS4BQ8N8V4 417 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 HOOK2Q96ED9 719 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 EYA3Q99504 573 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 EBF2Q9HAK2 575 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 ATP8A1Q9Y2Q0 1164 aa17.05■□□□□ 0.32
COMMD4-215ENST00000566843 A0A1B0GUA9 196 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 CFAP73A6NFT4 308 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 SLC8A3P57103 927 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 HIBCHQ6NVY1 386 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-215ENST00000566843 DNAAF5Q86Y56 855 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 MAB21L3Q8N8X9 362 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 CCDC63Q8NA47 563 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 TRIM51Q9BSJ1 452 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 AMFRQ9UKV5 643 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 TRAF3IP3Q9Y228 551 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 COL5A3P25940 1745 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-215ENST00000566843 FAM187AA6NFU0 413 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 DDX3XO00571 662 aaKnown RBP eCLIP17.04■□□□□ 0.323e-7■■□□□ 12.4
COMMD4-215ENST00000566843 GNPATO15228 680 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 DDX3YO15523 660 aaKnown RBP17.04■□□□□ 0.32
COMMD4-215ENST00000566843 GFPT2O94808 682 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 MMEP08473 750 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 CDK8P49336 464 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 CLNS1AP54105 237 aaKnown RBP17.04■□□□□ 0.32
COMMD4-215ENST00000566843 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
COMMD4-215ENST00000566843 EPHA7Q15375 998 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 PTPROQ16827 1216 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 FAXDC2Q96IV6 333 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 PABPC3Q9H361 631 aaKnown RBP17.04■□□□□ 0.32
COMMD4-215ENST00000566843 SIX2Q9NPC8 291 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 NCANO14594 1321 aa17.04■□□□□ 0.32
COMMD4-215ENST00000566843 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 SHBGP04278 402 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
COMMD4-215ENST00000566843 KLRC3Q07444 240 aa17.03■□□□□ 0.32
COMMD4-215ENST00000566843 PPP1R7Q15435 360 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms