RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 LINC01565O15544 149 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 TBX10O75333 385 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 ITGB1P05556 798 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 HMGB1P09429 215 aaKnown RBP21.4■■□□□ 1.02
ABCA3-204ENST00000566200 METAP2P50579 478 aaKnown RBP eCLIP21.4■■□□□ 1.02
ABCA3-204ENST00000566200 Q6ZUG5 572 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 FAM122AQ96E09 287 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 ZNF302Q9NR11 478 aa21.4■■□□□ 1.02
ABCA3-204ENST00000566200 NAP1L2Q9ULW6 460 aaPredicted RBP21.4■■□□□ 1.02
ABCA3-204ENST00000566200 NOC2LQ9Y3T9 749 aaKnown RBP21.4■■□□□ 1.02
ABCA3-204ENST00000566200 MYH9P35579 1960 aaKnown RBP21.39■■□□□ 1.02
ABCA3-204ENST00000566200 C19orf67A6NJJ6 358 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 FAM160B1Q5W0V3 765 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 SWSAP1Q6NVH7 229 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 PDXDC2PQ6P474 469 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 SPPL3Q8TCT6 385 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 BRF1Q92994 677 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.01
ABCA3-204ENST00000566200 NCK2O43639 380 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 EDIL3O43854 480 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 C22orf31O95567 290 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 STAG3L1P0CL83 205 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 IRS1P35568 1242 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 NFX1Q12986 1120 aaKnown RBP21.38■■□□□ 1.01
ABCA3-204ENST00000566200 CLUL1Q15846 466 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 ZNF484Q5JVG2 852 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 MIS18BP1Q6P0N0 1132 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 ADGRD2Q7Z7M1 963 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 KLHL23Q8NBE8 558 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 JAKMIP1Q96N16 626 aaKnown RBP21.38■■□□□ 1.01
ABCA3-204ENST00000566200 ZNF577Q9BSK1 485 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 PRKAG3Q9UGI9 489 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 GINS2Q9Y248 185 aa21.38■■□□□ 1.01
ABCA3-204ENST00000566200 ARIH1Q9Y4X5 557 aaPredicted RBP21.38■■□□□ 1.01
ABCA3-204ENST00000566200 MAFBQ9Y5Q3 323 aaPredicted RBP21.38■■□□□ 1.01
ABCA3-204ENST00000566200 PRPF3O43395 683 aaKnown RBP21.37■■□□□ 1.01
ABCA3-204ENST00000566200 MBTPS2O43462 519 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 HSPA4P34932 840 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 SARSP49591 514 aaKnown RBP21.37■■□□□ 1.01
ABCA3-204ENST00000566200 NTRK3Q16288 839 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 ADHFE1Q8IWW8 467 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 REXO1Q8N1G1 1221 aaKnown RBP21.37■■□□□ 1.01
ABCA3-204ENST00000566200 RASGRP4Q8TDF6 673 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 PHKBQ93100 1093 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 LENG9Q96B70 501 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 AGXT2Q9BYV1 514 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 IGFLR1Q9H665 355 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 HCN4Q9Y3Q4 1203 aa21.37■■□□□ 1.01
ABCA3-204ENST00000566200 CCDC196A0A1B0GTZ2 297 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 PPFIA3O75145 1194 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 RPS6KA5O75582 802 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 FGD1P98174 961 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 ADAM15Q13444 863 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 SMAD2Q15796 467 aaKnown RBP21.36■■□□□ 1.01
ABCA3-204ENST00000566200 NAALADL2Q58DX5 795 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 ZNF746Q6NUN9 644 aaPredicted RBP21.36■■□□□ 1.01
ABCA3-204ENST00000566200 PPP1R16BQ96T49 567 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 ADAM2Q99965 735 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 C6orf50Q9HD87 102 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 RGS18Q9NS28 235 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 TBC1D22BQ9NU19 505 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 HCSTQ9UBK5 93 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 ST3GAL5Q9UNP4 418 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 FAM50BQ9Y247 325 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 PCDHGC5Q9Y5F6 944 aa21.36■■□□□ 1.01
ABCA3-204ENST00000566200 C9IYK1 514 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 IBSPP21815 317 aaPredicted RBP21.35■■□□□ 1.01
ABCA3-204ENST00000566200 CIITAP33076 1130 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 SETQ01105 290 aaPredicted RBP21.35■■□□□ 1.01
ABCA3-204ENST00000566200 KIZQ2M2Z5 673 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 FAM228AQ86W67 206 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 FBXL16Q8N461 479 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 POF1BQ8WVV4 589 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 BBXQ8WY36 941 aaPredicted RBP21.35■■□□□ 1.01
ABCA3-204ENST00000566200 MSLNLQ96KJ4 702 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 LRFN2Q9ULH4 789 aa21.35■■□□□ 1.01
ABCA3-204ENST00000566200 PRR33A8MZF0 331 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 GPR32O75388 356 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 VTNP04004 478 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 RPS6KB1P23443 525 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 CRYBB1P53674 252 aaPredicted RBP21.34■■□□□ 1.01
ABCA3-204ENST00000566200 PRR16Q569H4 304 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 FAM102BQ5T8I3 360 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 MCTP2Q6DN12 878 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 BLOC1S2Q6QNY1 142 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 TRMT1LQ7Z2T5 733 aaKnown RBP21.34■■□□□ 1.01
ABCA3-204ENST00000566200 CKAP2LQ8IYA6 745 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 SMAP1Q8IYB5 467 aaPredicted RBP21.34■■□□□ 1.01
ABCA3-204ENST00000566200 OSMRQ99650 979 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 CLEC1BQ9P126 229 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 PCDHB7Q9Y5E2 793 aa21.34■■□□□ 1.01
ABCA3-204ENST00000566200 DCXO43602 365 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 ALADP13716 330 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 SMAD4Q13485 552 aaKnown RBP21.33■■□□□ 1.01
ABCA3-204ENST00000566200 DSC3Q14574 896 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 SLC24A5Q71RS6 500 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 LINC01465Q8N7H1 131 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 CCDC12Q8WUD4 166 aaPredicted RBP21.33■■□□□ 1.01
ABCA3-204ENST00000566200 C1orf112Q9NSG2 853 aa21.33■■□□□ 1.01
ABCA3-204ENST00000566200 GABBR1Q9UBS5 961 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms