RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
CMTM3-212ENST00000566121 SKIV2LQ15477 1246 aaKnown RBP17.19■□□□□ 0.34
CMTM3-212ENST00000566121 PUS10Q3MIT2 529 aaKnown RBP17.19■□□□□ 0.34
CMTM3-212ENST00000566121 B3GNT9Q6UX72 402 aa17.19■□□□□ 0.34
CMTM3-212ENST00000566121 CMTR2Q8IYT2 770 aaKnown RBP17.19■□□□□ 0.34
CMTM3-212ENST00000566121 MICALL1Q8N3F8 863 aa17.19■□□□□ 0.34
CMTM3-212ENST00000566121 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
CMTM3-212ENST00000566121 TCEAL9Q9UHQ7 104 aa17.19■□□□□ 0.34
CMTM3-212ENST00000566121 PCDHA4Q9UN74 947 aa17.19■□□□□ 0.34
CMTM3-212ENST00000566121 ADGRA3Q8IWK6 1321 aa17.19■□□□□ 0.34
CMTM3-212ENST00000566121 UPP2O95045 317 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 C22orf31O95567 290 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 CD52P31358 61 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 CRYBB1P53674 252 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-212ENST00000566121 FAM189BP81408 668 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 CDC42EP1Q00587 391 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 TFF2Q03403 129 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 GPM6BQ13491 265 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 LEXMQ3ZCV2 418 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 PRR16Q569H4 304 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 LINC01599Q8WXQ3 324 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 C11orf84Q9BUA3 381 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-212ENST00000566121 FAM49AQ9H0Q0 323 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-212ENST00000566121 NRBP2Q9NSY0 501 aa17.18■□□□□ 0.34
CMTM3-212ENST00000566121 GPR182O15218 404 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 MSH4O15457 936 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 CDKL5O76039 1030 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 JAK3P52333 1124 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 NLRP5P59047 1200 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 CCT2P78371 535 aaKnown RBP17.17■□□□□ 0.34
CMTM3-212ENST00000566121 PAK2Q13177 524 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 NPY5RQ15761 445 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 RALGAPA2Q2PPJ7 1873 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 TRAPPC12Q8WVT3 735 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-212ENST00000566121 NCOA5Q9HCD5 579 aaKnown RBP17.17■□□□□ 0.34
CMTM3-212ENST00000566121 ERVK-5Q9HDB9 667 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 RGS18Q9NS28 235 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 MTUS1Q9ULD2 1270 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 MYO7AQ13402 2215 aa17.17■□□□□ 0.34
CMTM3-212ENST00000566121 CPLX1O14810 134 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 GPR32O75388 356 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 PSMD10O75832 226 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 NEFLP07196 543 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
CMTM3-212ENST00000566121 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 BANK1Q8NDB2 785 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
CMTM3-212ENST00000566121 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 NSUN3Q9H649 340 aaKnown RBP17.16■□□□□ 0.34
CMTM3-212ENST00000566121 ELAC1Q9H777 363 aaKnown RBP17.16■□□□□ 0.34
CMTM3-212ENST00000566121 DISC1Q9NRI5 854 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 PDRG1Q9NUG6 133 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 COL4A4P53420 1690 aaPredicted RBP17.16■□□□□ 0.34
CMTM3-212ENST00000566121 STK36Q9NRP7 1315 aa17.16■□□□□ 0.34
CMTM3-212ENST00000566121 MYH9P35579 1960 aaKnown RBP17.15■□□□□ 0.34
CMTM3-212ENST00000566121 RPS6KA5O75582 802 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 TMOD1P28289 359 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 KCNQ1P51787 676 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
CMTM3-212ENST00000566121 ANKRD1Q15327 319 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 CTC1Q2NKJ3 1217 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 PPP4R3AQ6IN85 833 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 SLC24A5Q71RS6 500 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 RSPH1Q8WYR4 309 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 NIFKQ9BYG3 293 aaKnown RBP17.15■□□□□ 0.34
CMTM3-212ENST00000566121 GABBR1Q9UBS5 961 aa17.15■□□□□ 0.34
CMTM3-212ENST00000566121 DDX39AO00148 427 aaKnown RBP17.14■□□□□ 0.33
CMTM3-212ENST00000566121 PFKFB2O60825 505 aa17.14■□□□□ 0.33
CMTM3-212ENST00000566121 TARBP2Q15633 366 aaKnown RBP17.14■□□□□ 0.33
CMTM3-212ENST00000566121 RASGRP4Q8TDF6 673 aa17.14■□□□□ 0.33
CMTM3-212ENST00000566121 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
CMTM3-212ENST00000566121 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
CMTM3-212ENST00000566121 IGKV6-21A0A0C4DH24 114 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 C9IYK1 514 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 ZNF862O60290 1169 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 GAS7O60861 476 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 MMP1P03956 469 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 OATP04181 439 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 DSC3Q14574 896 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 CKAP2LQ8IYA6 745 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 ETNPPLQ8TBG4 499 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
CMTM3-212ENST00000566121 PHF20Q9BVI0 1012 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 C1QTNF1Q9BXJ1 281 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 ADAMTS10Q9H324 1103 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 ST3GAL5Q9UNP4 418 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 PPME1Q9Y570 386 aa17.13■□□□□ 0.33
CMTM3-212ENST00000566121 TBX3O15119 743 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms