RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TRMT1LQ7Z2T5 733 aaKnown RBP22.34■■□□□ 1.17
CMTM3-211ENST00000565922 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
CMTM3-211ENST00000565922 ZNF710Q8N1W2 664 aa22.34■■□□□ 1.17
CMTM3-211ENST00000565922 FOXP1Q9H334 677 aaPredicted RBP22.34■■□□□ 1.17
CMTM3-211ENST00000565922 FAM205CA6NFA0 338 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 ZBTB42B2RXF5 422 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 ZNF862O60290 1169 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 GJB5O95377 273 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 C22orf31O95567 290 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 CA3P07451 260 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 TMOD1P28289 359 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 MKRN4PQ13434 485 aaPredicted RBP22.33■■□□□ 1.17
CMTM3-211ENST00000565922 LPIN1Q14693 890 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 GRIN2CQ14957 1233 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 TCTN1Q2MV58 587 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 XKR3Q5GH77 459 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 ODR4Q5SWX8 454 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 FBXO18Q8NFZ0 1043 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 ZBTB10Q96DT7 871 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 GAS2L1Q99501 681 aaPredicted RBP22.33■■□□□ 1.17
CMTM3-211ENST00000565922 CELF4Q9BZC1 486 aaKnown RBP22.33■■□□□ 1.17
CMTM3-211ENST00000565922 VAV3Q9UKW4 847 aa22.33■■□□□ 1.17
CMTM3-211ENST00000565922 NEMFO60524 1076 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 FOSL2P15408 326 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 PSMC5P62195 406 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 GUCY1B3Q02153 619 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 TMEM62Q0P6H9 643 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 CALCRLQ16602 461 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 UGCGQ16739 394 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 MYOCDQ8IZQ8 938 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 METTL13Q8N6R0 699 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 MYLIPQ8WY64 445 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 HAS1Q92839 578 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 MAP7D2Q96T17 732 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 RAD9AQ99638 391 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 FTHL17Q9BXU8 183 aa22.32■■□□□ 1.16
CMTM3-211ENST00000565922 SEPT9Q9UHD8 586 aaPredicted RBP22.32■■□□□ 1.16
CMTM3-211ENST00000565922 ARID2Q68CP9 1835 aa22.31■■□□□ 1.16
CMTM3-211ENST00000565922 MYOGP15173 224 aa22.31■■□□□ 1.16
CMTM3-211ENST00000565922 QARSP47897 775 aaKnown RBP22.31■■□□□ 1.16
CMTM3-211ENST00000565922 TBC1D8BQ0IIM8 1120 aa22.31■■□□□ 1.16
CMTM3-211ENST00000565922 ORC2Q13416 577 aaPredicted RBP22.31■■□□□ 1.16
CMTM3-211ENST00000565922 KIAA0319LQ8IZA0 1049 aa22.31■■□□□ 1.16
CMTM3-211ENST00000565922 TMX3Q96JJ7 454 aa22.31■■□□□ 1.16
CMTM3-211ENST00000565922 INSL6Q9Y581 213 aa22.31■■□□□ 1.16
CMTM3-211ENST00000565922 TTC3P53804 2025 aa22.3■■□□□ 1.16
CMTM3-211ENST00000565922 P4HBP07237 508 aaKnown RBP22.3■■□□□ 1.16
CMTM3-211ENST00000565922 PAK2Q13177 524 aa22.3■■□□□ 1.16
CMTM3-211ENST00000565922 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.3■■□□□ 1.164e-6■■■□□ 19.2
CMTM3-211ENST00000565922 BANK1Q8NDB2 785 aa22.3■■□□□ 1.16
CMTM3-211ENST00000565922 NIFKQ9BYG3 293 aaKnown RBP22.3■■□□□ 1.16
CMTM3-211ENST00000565922 OSBPL7Q9BZF2 842 aa22.3■■□□□ 1.16
CMTM3-211ENST00000565922 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
CMTM3-211ENST00000565922 NLRC5Q86WI3 1866 aa22.3■■□□□ 1.16
CMTM3-211ENST00000565922 EPHA7Q15375 998 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 EFCAB12Q6NXP0 572 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 TOP1MTQ969P6 601 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 JPH2Q9BR39 696 aaPredicted RBP22.29■■□□□ 1.16
CMTM3-211ENST00000565922 BACH2Q9BYV9 841 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 NOL7Q9UMY1 257 aaKnown RBP22.29■■□□□ 1.16
CMTM3-211ENST00000565922 GINS2Q9Y248 185 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 PPME1Q9Y570 386 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 COL4A6Q14031 1691 aa22.29■■□□□ 1.16
CMTM3-211ENST00000565922 RALGAPA2Q2PPJ7 1873 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 EML1O00423 815 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 CD52P31358 61 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 TRAPPC10P48553 1259 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 NCAPH2Q6IBW4 605 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 EXOC8Q8IYI6 725 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 PRDM12Q9H4Q4 367 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 AKT3Q9Y243 479 aa22.28■■□□□ 1.16
CMTM3-211ENST00000565922 CDH23Q9H251 3354 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 RPS6KA5O75582 802 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 CLCN3P51790 818 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 CRYBB1P53674 252 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 CDC42EP1Q00587 391 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 TAP1Q03518 808 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 TARBP2Q15633 366 aaKnown RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 MTERF2Q49AM1 385 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 FAM117BQ6P1L5 589 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 TMCO2Q7Z6W1 182 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 NOSTRINQ8IVI9 506 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 NEK9Q8TD19 979 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 TTC12Q9H892 705 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 AGO3Q9H9G7 860 aaKnown RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 PADI3Q9ULW8 664 aa22.27■■□□□ 1.16
CMTM3-211ENST00000565922 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.27■■□□□ 1.16
CMTM3-211ENST00000565922 DDX11L8A8MPP1 907 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 GPR182O15218 404 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 MCM7P33993 719 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 DNM2P50570 870 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 HTRA4P83105 476 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-211ENST00000565922 SPIRE1Q08AE8 756 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 OTUD6AQ7L8S5 288 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 C4orf19Q8IY42 314 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 LINC01465Q8N7H1 131 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 MAFAQ8NHW3 353 aaPredicted RBP22.26■■□□□ 1.15
CMTM3-211ENST00000565922 YME1L1Q96TA2 773 aa22.26■■□□□ 1.15
CMTM3-211ENST00000565922 LXNQ9BS40 222 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms