RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 SQORQ9Y6N5 450 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 ZBTB42B2RXF5 422 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 STBD1O95210 358 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 ACTN1P12814 892 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 YWHABP31946 246 aaKnown RBP14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 RFC5P40937 340 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 CCL23P55773 120 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 HIC1Q14526 733 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 UGCGQ16739 394 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 ODR4Q5SWX8 454 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 PSRC1Q6PGN9 363 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 ANO5Q75V66 913 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 USP38Q8NB14 1042 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 SLC7A3Q8WY07 619 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 DHX38Q92620 1227 aaKnown RBP14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 CYP26B1Q9NR63 512 aa14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 SEPT9Q9UHD8 586 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 TRIP12Q14669 1992 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-204ENST00000565887 POTEMA6NI47 508 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 EFCAB14O75071 495 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 F13A1P00488 732 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 FGBP02675 491 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 CSF2RAP15509 400 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 LONP1P36776 959 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 CTTNQ14247 550 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 ZNF618Q5T7W0 954 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 EFCAB12Q6NXP0 572 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 TRMT1LQ7Z2T5 733 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 CATSPER3Q86XQ3 398 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 DNAJB3Q8WWF6 145 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 CEP170P1Q96L14 293 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 NT5C3AQ9H0P0 336 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 WNT8AQ9H1J5 351 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 DBR1Q9UK59 544 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 WDR81Q562E7 1941 aa14.07□□□□□ -0.16
SHCBP1-204ENST00000565887 ASAP2O43150 1006 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 MAFO75444 373 aaPredicted RBP14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 C22orf31O95567 290 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 CXCL10P02778 98 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 SPATA31C1P0DKV0 1188 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 CCT6AP40227 531 aaKnown RBP14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 NUCB2P80303 420 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 CYP4A11Q02928 519 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 SLC39A14Q15043 492 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 XKR9Q5GH70 373 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 KIAA0319LQ8IZA0 1049 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 TDHQ8IZJ6 230 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 TCP11Q8WWU5 503 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 PRO3102Q9H379 93 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 DNM3Q9UQ16 869 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 KDM3AQ9Y4C1 1321 aa14.06□□□□□ -0.16
SHCBP1-204ENST00000565887 IGKV6-21A0A0C4DH24 114 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 VWA3AA6NCI4 1184 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 DGAT1O75907 488 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 YEATS4O95619 227 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 BRD1O95696 1058 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 UBA7P41226 1012 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 NASPP49321 788 aaPredicted RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 PTPAQ15257 358 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 SNX29Q8TEQ0 813 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 TRAPPC12Q8WVT3 735 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 APBB2Q92870 758 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 SCLYQ96I15 445 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 CELF4Q9BZC1 486 aaKnown RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 FAM49AQ9H0Q0 323 aaPredicted RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 DHX33Q9H6R0 707 aaKnown RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 SUGCTQ9HAC7 445 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 SRPRBQ9Y5M8 271 aaKnown RBP14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 CLIC4Q9Y696 253 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
SHCBP1-204ENST00000565887 PPP6R2O75170 966 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 MED24O75448 989 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 CRYBB1P53674 252 aaPredicted RBP14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 POLGP54098 1239 aaPredicted RBP14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 IKBKEQ14164 716 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 STK38Q15208 465 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 IL17AQ16552 155 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 TMEM240Q5SV17 173 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 HYIQ5T013 277 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 CNKSR3Q6P9H4 555 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 ZNF365Q70YC5 407 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 HERVK_113Q902F9 699 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 SEPT8Q92599 483 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 WNT8BQ93098 351 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 CALML4Q96GE6 196 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 CDK5RAP3Q96JB5 506 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
SHCBP1-204ENST00000565887 WRAP73Q9P2S5 460 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms