RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 FGFR1P11362 822 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 NOP2P46087 812 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 MXI1P50539 228 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 PFKPQ01813 784 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 PPA1Q15181 289 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ANKDD1AQ495B1 522 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 KAZNQ674X7 775 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 CXorf57Q6NSI4 855 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 CNSTQ6PJW8 725 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 SYNE3Q6ZMZ3 975 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 MTERF4Q7Z6M4 381 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 RNF180Q86T96 592 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 FCHSD1Q86WN1 690 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ANKRD20A12PQ8NF67 263 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ACSF2Q96CM8 615 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 FAM167BQ9BTA0 163 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 KCTD10Q9H3F6 313 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ACAD9Q9H845 621 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 TOPORSQ9NS56 1045 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 FAM8A1Q9UBU6 413 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 RPS6KA6Q9UK32 745 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ZNF232Q9UNY5 417 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 MTF2Q9Y483 593 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 FGFR1OPO95684 399 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 STAU1O95793 577 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 TPM1P09493 284 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 HARSP12081 509 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 INPP5BP32019 993 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 SCNN1BP51168 640 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 WNT7BP56706 349 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 AP2B1P63010 937 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 PWP1Q13610 501 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ZNF267Q14586 743 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 RC3H1Q5TC82 1133 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 SYDE2Q5VT97 1194 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 RNF219Q5W0B1 726 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 FBXL19Q6PCT2 694 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 CCDC80Q76M96 950 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 HOOK3Q86VS8 718 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 CEP97Q8IW35 865 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 TNIP2Q8NFZ5 429 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ADAM32Q8TC27 787 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 RASGRP4Q8TDF6 673 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 KCNG4Q8TDN1 519 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 TBATAQ96M53 351 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 RMDN3Q96TC7 470 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 BAG1Q99933 345 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 TSPAN10Q9H1Z9 355 aaPredicted RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 NPHS2Q9NP85 383 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 PRDM9Q9NQV7 894 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ITM2CQ9NQX7 267 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 KLHL11Q9NVR0 708 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ARHGAP28Q9P2N2 729 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 ZMAT5Q9UDW3 170 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 ZMYM5Q9UJ78 669 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 BLOC1S6Q9UL45 172 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 HRH3Q9Y5N1 445 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 RGPD2P0DJD1 1756 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ALPK3Q96L96 1907 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 RTL1A6NKG5 1358 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 SGTAO43765 313 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 DKC1O60832 514 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-216ENST00000565803 MYCLP12524 364 aaPredicted RBP3.4□□□□□ -1.87
CHD9-216ENST00000565803 PAMP19021 973 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 XPAP23025 273 aaPredicted RBP3.4□□□□□ -1.87
CHD9-216ENST00000565803 HTR3AP46098 478 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 RBM5P52756 815 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-216ENST00000565803 MPP1Q00013 466 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 KLHL30Q0D2K2 578 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 IKQ13123 557 aaPredicted RBP3.4□□□□□ -1.87
CHD9-216ENST00000565803 SMAD4Q13485 552 aaKnown RBP3.4□□□□□ -1.87
CHD9-216ENST00000565803 NEUROD1Q13562 356 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ZNF460Q14592 562 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 RASA2Q15283 850 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 TERF2Q15554 542 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 CDCA2Q69YH5 1023 aaPredicted RBP3.4□□□□□ -1.87
CHD9-216ENST00000565803 NXNQ6DKJ4 435 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 SLC30A6Q6NXT4 461 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 OLFML1Q6UWY5 402 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ISLR2Q6UXK2 745 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 TPTE2Q6XPS3 522 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 EPM2AIP1Q7L775 607 aaPredicted RBP3.4□□□□□ -1.87
CHD9-216ENST00000565803 CCDC186Q7Z3E2 898 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 COLGALT2Q8IYK4 626 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ATG16L2Q8NAA4 619 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 RFWD2Q8NHY2 731 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 BRSK1Q8TDC3 778 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 FAM122AQ96E09 287 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 CCDC114Q96M63 670 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 RUSC1Q9BVN2 902 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ATP6V0A4Q9HBG4 840 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ZNF304Q9HCX3 659 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 UBN1Q9NPG3 1134 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 SUN2Q9UH99 717 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 PCDHB10Q9UN67 800 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 ANKRD6Q9Y2G4 727 aa3.4□□□□□ -1.87
CHD9-216ENST00000565803 CDHR2Q9BYE9 1310 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 SERTM1A2A2V5 107 aa3.39□□□□□ -1.87
CHD9-216ENST00000565803 AKR1B15C9JRZ8 316 aaPredicted RBP3.39□□□□□ -1.87
CHD9-216ENST00000565803 CHL1O00533 1208 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms