RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-211ENST00000565662 NPAS4Q8IUM7 802 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 ETNPPLQ8TBG4 499 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 RSPH1Q8WYR4 309 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 ZSCAN31Q96LW9 406 aaPredicted RBP18.85■□□□□ 0.61
USB1-211ENST00000565662 LLPHQ9BRT6 129 aaKnown RBP18.85■□□□□ 0.61
USB1-211ENST00000565662 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
USB1-211ENST00000565662 C1orf112Q9NSG2 853 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 ADGRA3Q8IWK6 1321 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.84■□□□□ 0.61
USB1-211ENST00000565662 DLL1O00548 723 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 MARCH6O60337 910 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 C22orf31O95567 290 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 RB1P06400 928 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 CRYBB1P53674 252 aaPredicted RBP18.84■□□□□ 0.61
USB1-211ENST00000565662 HMGN5P82970 282 aaKnown RBP18.84■□□□□ 0.61
USB1-211ENST00000565662 INF2Q27J81 1249 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 FBXO22Q8NEZ5 403 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 LIMCH1Q9UPQ0 1083 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 KIF3AQ9Y496 699 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 MTCH2Q9Y6C9 303 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 CHD9Q3L8U1 2897 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 TTC3P53804 2025 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 NLRC5Q86WI3 1866 aa18.84■□□□□ 0.61
USB1-211ENST00000565662 RPS6KA5O75582 802 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 DNM2P50570 870 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 TBC1D8BQ0IIM8 1120 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 PPP2R5CQ13362 524 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 ME3Q16798 604 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 TIGD5Q53EQ6 642 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 FIBCD1Q8N539 461 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 LARP6Q9BRS8 491 aaKnown RBP18.83■□□□□ 0.6
USB1-211ENST00000565662 LMAN2LQ9H0V9 348 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 UNC45AQ9H3U1 944 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 KCNMB3Q9NPA1 279 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 PADI3Q9ULW8 664 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 KCNJ14Q9UNX9 436 aa18.83■□□□□ 0.6
USB1-211ENST00000565662 ZBTB42B2RXF5 422 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 CHMP2AO43633 222 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 GAS2O43903 313 aaKnown RBP18.82■□□□□ 0.6
USB1-211ENST00000565662 CCNT1O60563 726 aaKnown RBP18.82■□□□□ 0.6
USB1-211ENST00000565662 TDP2O95551 362 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 MMP1P03956 469 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 CD52P31358 61 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 PSMC5P62195 406 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 MRPS5P82675 430 aaKnown RBP18.82■□□□□ 0.6
USB1-211ENST00000565662 GRB10Q13322 594 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 ORC2Q13416 577 aaPredicted RBP18.82■□□□□ 0.6
USB1-211ENST00000565662 TCTN1Q2MV58 587 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 NAALADL2Q58DX5 795 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 FAM117BQ6P1L5 589 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 B3GNT9Q6UX72 402 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 KIAA0319LQ8IZA0 1049 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 METTL13Q8N6R0 699 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 NSUN7Q8NE18 718 aaKnown RBP18.82■□□□□ 0.6
USB1-211ENST00000565662 TRAPPC12Q8WVT3 735 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 C11orf84Q9BUA3 381 aaPredicted RBP18.82■□□□□ 0.6
USB1-211ENST00000565662 PLVAPQ9BX97 442 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 EVPLQ92817 2033 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 LOXHD1Q8IVV2 1947 aa18.82■□□□□ 0.6
USB1-211ENST00000565662 DENND3A2RUS2 1198 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 LCHNA4D1U4 455 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 CARNS1A5YM72 827 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 ENPP3O14638 875 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 HOXA2O43364 376 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 UPP2O95045 317 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 ATP4AP20648 1035 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 PIK3AP1Q6ZUJ8 805 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 CMTR2Q8IYT2 770 aaKnown RBP18.81■□□□□ 0.6
USB1-211ENST00000565662 NEK9Q8TD19 979 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 AIFM3Q96NN9 605 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 NIFKQ9BYG3 293 aaKnown RBP18.81■□□□□ 0.6
USB1-211ENST00000565662 INO80BQ9C086 356 aaPredicted RBP18.81■□□□□ 0.6
USB1-211ENST00000565662 LRFN2Q9ULH4 789 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 AKT3Q9Y243 479 aa18.81■□□□□ 0.6
USB1-211ENST00000565662 C5orf67F2Z3F1 127 aa18.8■□□□□ 0.6
USB1-211ENST00000565662 ADAMTS3O15072 1205 aa18.8■□□□□ 0.6
USB1-211ENST00000565662 CTDNEP1O95476 244 aa18.8■□□□□ 0.6
USB1-211ENST00000565662 P4HBP07237 508 aaKnown RBP18.8■□□□□ 0.6
USB1-211ENST00000565662 QARSP47897 775 aaKnown RBP18.8■□□□□ 0.6
USB1-211ENST00000565662 CERS4Q9HA82 394 aa18.8■□□□□ 0.6
USB1-211ENST00000565662 SEPT9Q9UHD8 586 aaPredicted RBP18.8■□□□□ 0.6
USB1-211ENST00000565662 CHD7Q9P2D1 2997 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 TRANK1O15050 2925 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 H3BNC9 293 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 NCK2O43639 380 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 ST18O60284 1047 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 SARSP49591 514 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 BTG3Q14201 252 aaPredicted RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 SKIV2LQ15477 1246 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 CSPP1Q1MSJ5 1256 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 EPC2Q52LR7 807 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 EFCAB12Q6NXP0 572 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 SLC24A5Q71RS6 500 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 OTUD6AQ7L8S5 288 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 ZNF410Q86VK4 478 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 TMEM192Q8IY95 271 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 MICALL1Q8N3F8 863 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 PPM1EQ8WY54 764 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms