RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 OR6J1Q8NGC5 347 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 COPS5Q92905 334 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 DHX58Q96C10 678 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
GINS3-205ENST00000564814 KATNAL1Q9BW62 490 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 DHX33Q9H6R0 707 aaKnown RBP8.35□□□□□ -1.07
GINS3-205ENST00000564814 AZI2Q9H6S1 392 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 C17orf75Q9HAS0 396 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 SPC25Q9HBM1 224 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
GINS3-205ENST00000564814 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 GABBR1Q9UBS5 961 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 SEL1LQ9UBV2 794 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 SERTAD1Q9UHV2 236 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 SAMM50Q9Y512 469 aa8.35□□□□□ -1.07
GINS3-205ENST00000564814 UNC80Q8N2C7 3258 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 KAT6AQ92794 2004 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 MYH11P35749 1972 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 DDX39AO00148 427 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 CHMP2AO43633 222 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 ZEB2O60315 1214 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 DGAT1O75907 488 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 RHOBTB3O94955 611 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 RPLP2P05387 115 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 PLA2G4BP0C869 781 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 MAPTP10636 758 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 ELNP15502 786 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PPP1R2P41236 205 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 ZNF445P59923 1031 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 ADAM17P78536 824 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PURAQ00577 322 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 PRKCEQ02156 737 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 CYP4A11Q02928 519 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 TRIM32Q13049 653 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 CTTNQ14247 550 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 FSCN1Q16658 493 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 SLC9C1Q4G0N8 1177 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PRAMEF19Q5SWL8 479 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 TMEM63BQ5T3F8 832 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 RINT1Q6NUQ1 792 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 SWSAP1Q6NVH7 229 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 UNC13DQ70J99 1090 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 TPH2Q8IWU9 490 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PDILTQ8N807 584 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PCSK9Q8NBP7 692 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 BANK1Q8NDB2 785 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 AFG1LQ8WV93 481 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 DNAJC19Q96DA6 116 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PAGE5Q96GU1 130 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 JPH2Q9BR39 696 aaPredicted RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 FUCA2Q9BTY2 467 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 AP5M1Q9H0R1 490 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 OLFML3Q9NRN5 406 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 NRBP2Q9NSY0 501 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 KCNG1Q9UIX4 513 aa8.34□□□□□ -1.07
GINS3-205ENST00000564814 MKI67P46013 3256 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 KIAA0100Q14667 2235 aaKnown RBP8.34□□□□□ -1.07
GINS3-205ENST00000564814 HTTP42858 3142 aa8.34□□□□□ -1.08
GINS3-205ENST00000564814 CENPFP49454 3210 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 NRCAMQ92823 1304 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 MBLAC1A4D2B0 266 aaPredicted RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 MYMKA6NI61 221 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 RRN3P2A6NIE6 340 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 E9PMD0 336 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 H3BRB1 525 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 MAGEB2O15479 319 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 DYNC1LI2O43237 492 aaPredicted RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 KLRC4O43908 158 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 CAVIN2O95810 425 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 CCND3P30281 292 aaPredicted RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 ABCD1P33897 745 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 RFC5P40937 340 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 PSMC6P62333 389 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 POU5F1BQ06416 359 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 PSMD2Q13200 908 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 MCM6Q14566 821 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 PLCB4Q15147 1175 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 ZNF484Q5JVG2 852 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 GJC2Q5T442 439 aaPredicted RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 CAVIN1Q6NZI2 390 aaKnown RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 FAM43BQ6ZT52 329 aaPredicted RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 RNF180Q86T96 592 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 LINC01465Q8N7H1 131 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 MCPH1Q8NEM0 835 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 RASSF8Q8NHQ8 419 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 SH3TC2Q8TF17 1288 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 DDX12PQ92771 950 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 KAT2BQ92831 832 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 ZNF333Q96JL9 665 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 NTPCRQ9BSD7 190 aaKnown RBP8.33□□□□□ -1.08
GINS3-205ENST00000564814 CRISPLD2Q9H0B8 497 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.33□□□□□ -1.08
GINS3-205ENST00000564814 BHMT2Q9H2M3 363 aa8.33□□□□□ -1.08
GINS3-205ENST00000564814 ST6GALNAC4Q9H4F1 302 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms