RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 KHSRPQ92945 711 aaKnown RBP eCLIP20.98■□□□□ 0.958e-8■□□□□ 8.3
CLN6-204ENST00000564752 ZNF577Q9BSK1 485 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 PLVAPQ9BX97 442 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 TBC1D22BQ9NU19 505 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 PDRG1Q9NUG6 133 aa20.98■□□□□ 0.95
CLN6-204ENST00000564752 ZBTB42B2RXF5 422 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 H3BQ06 376 aaPredicted RBP20.97■□□□□ 0.95
CLN6-204ENST00000564752 NCK2O43639 380 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 PPFIA3O75145 1194 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 IL9P15248 144 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 FAM43BQ6ZT52 329 aaPredicted RBP20.97■□□□□ 0.95
CLN6-204ENST00000564752 CMTR2Q8IYT2 770 aaKnown RBP20.97■□□□□ 0.95
CLN6-204ENST00000564752 CCDC148Q8NFR7 591 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 UIMC1Q96RL1 719 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 TMX1Q9H3N1 280 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 MYO7AQ13402 2215 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 COL1A2P08123 1366 aa20.97■□□□□ 0.95
CLN6-204ENST00000564752 CPLX1O14810 134 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 STAG3L1P0CL83 205 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 CIITAP33076 1130 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 SETQ01105 290 aaPredicted RBP20.96■□□□□ 0.95
CLN6-204ENST00000564752 TMEM266Q2M3C6 531 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 ZNF746Q6NUN9 644 aaPredicted RBP20.96■□□□□ 0.95
CLN6-204ENST00000564752 TRIM22Q8IYM9 498 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 GJD3Q8N144 294 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 LRFN3Q9BTN0 628 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 CDHR5Q9HBB8 845 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
CLN6-204ENST00000564752 MAFBQ9Y5Q3 323 aaPredicted RBP20.96■□□□□ 0.95
CLN6-204ENST00000564752 MRPL42Q9Y6G3 142 aaKnown RBP20.96■□□□□ 0.95
CLN6-204ENST00000564752 SMAP1Q8IYB5 467 aaPredicted RBP20.95■□□□□ 0.94
CLN6-204ENST00000564752 BICD2Q8TD16 824 aa20.95■□□□□ 0.94
CLN6-204ENST00000564752 BBXQ8WY36 941 aaPredicted RBP20.95■□□□□ 0.94
CLN6-204ENST00000564752 P2RX5Q93086 422 aa20.95■□□□□ 0.94
CLN6-204ENST00000564752 ZNF274Q96GC6 653 aaPredicted RBP20.95■□□□□ 0.94
CLN6-204ENST00000564752 LARP6Q9BRS8 491 aaKnown RBP20.95■□□□□ 0.94
CLN6-204ENST00000564752 HCN4Q9Y3Q4 1203 aa20.95■□□□□ 0.94
CLN6-204ENST00000564752 NOC2LQ9Y3T9 749 aaKnown RBP20.95■□□□□ 0.94
CLN6-204ENST00000564752 PCDHA10Q9Y5I2 948 aa20.95■□□□□ 0.94
CLN6-204ENST00000564752 PI4K2BG5E9Z4 385 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
CLN6-204ENST00000564752 LTBRP36941 435 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 ANAPC15P60006 121 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 NFX1Q12986 1120 aaKnown RBP20.94■□□□□ 0.94
CLN6-204ENST00000564752 STK3Q13188 491 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 CAMK1Q14012 370 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 CTC1Q2NKJ3 1217 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 PRR16Q569H4 304 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 NAALADL2Q58DX5 795 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 CPLX2Q6PUV4 134 aaKnown RBP20.94■□□□□ 0.94
CLN6-204ENST00000564752 EP400NLQ6ZTU2 488 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 CKAP2LQ8IYA6 745 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 RASGRP4Q8TDF6 673 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 TMEM40Q8WWA1 233 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 ERVK-5Q9HDB9 667 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 ALG13Q9NP73 1137 aaKnown RBP20.94■□□□□ 0.94
CLN6-204ENST00000564752 CLDND1Q9NY35 253 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 GINS2Q9Y248 185 aa20.94■□□□□ 0.94
CLN6-204ENST00000564752 MGEA5O60502 916 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 RPS6KA5O75582 802 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 C22orf31O95567 290 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 MMP1P03956 469 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 PSAPP07602 524 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 SARSP49591 514 aaKnown RBP20.93■□□□□ 0.94
CLN6-204ENST00000564752 SSRP1Q08945 709 aaKnown RBP20.93■□□□□ 0.94
CLN6-204ENST00000564752 HYAL1Q12794 435 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 TMEM31Q5JXX7 168 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 LENG9Q96B70 501 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 LRFN2Q9ULH4 789 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 ST3GAL5Q9UNP4 418 aa20.93■□□□□ 0.94
CLN6-204ENST00000564752 RALGAPA2Q2PPJ7 1873 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 EDIL3O43854 480 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 GPR37L1O60883 481 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 ITGB1P05556 798 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 PAN2Q504Q3 1202 aaKnown RBP20.92■□□□□ 0.94
CLN6-204ENST00000564752 ODR4Q5SWX8 454 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 SPPL3Q8TCT6 385 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 C11orf16Q9NQ32 467 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 RGS18Q9NS28 235 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 GABBR1Q9UBS5 961 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 PCDHB7Q9Y5E2 793 aa20.92■□□□□ 0.94
CLN6-204ENST00000564752 GPR182O15218 404 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 GPR32O75388 356 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 DEXIO95424 95 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 DNAJB1P25685 340 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 SSTR3P32745 418 aaPredicted RBP20.91■□□□□ 0.94
CLN6-204ENST00000564752 GATMP50440 423 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 CRYBB1P53674 252 aaPredicted RBP20.91■□□□□ 0.94
CLN6-204ENST00000564752 KIZQ2M2Z5 673 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 TRMT1LQ7Z2T5 733 aaKnown RBP20.91■□□□□ 0.94
CLN6-204ENST00000564752 NLRC5Q86WI3 1866 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 KLHL23Q8NBE8 558 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 ADAM2Q99965 735 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 SH3GLB2Q9NR46 395 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 TCEAL9Q9UHQ7 104 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 FAM50BQ9Y247 325 aa20.91■□□□□ 0.94
CLN6-204ENST00000564752 DENND3A2RUS2 1198 aa20.9■□□□□ 0.94
CLN6-204ENST00000564752 FAM86C2PA6NEL3 165 aa20.9■□□□□ 0.94
CLN6-204ENST00000564752 USP11P51784 963 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms