RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 BACH1O14867 736 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 MGEA5O60502 916 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 RPS6KA5O75582 802 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 GLP2RO95838 553 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 KLRC1P26715 233 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 CLK2P49760 499 aaKnown RBP16.05■□□□□ 0.16
CDR2-204ENST00000564542 UBE3AQ05086 875 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 NFX1Q12986 1120 aaKnown RBP16.05■□□□□ 0.16
CDR2-204ENST00000564542 RTN1Q16799 776 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 RNF20Q5VTR2 975 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 ABHD15Q6UXT9 468 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
CDR2-204ENST00000564542 RGS18Q9NS28 235 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 NOC2LQ9Y3T9 749 aaKnown RBP16.05■□□□□ 0.16
CDR2-204ENST00000564542 PCDHB7Q9Y5E2 793 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 PCDHB12Q9Y5F1 795 aa16.05■□□□□ 0.16
CDR2-204ENST00000564542 FSD2A1L4K1 749 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 DENND3A2RUS2 1198 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 DDX39AO00148 427 aaKnown RBP16.04■□□□□ 0.16
CDR2-204ENST00000564542 ZBTB43O43298 467 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 ZNF76P36508 570 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 MRE11P49959 708 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 ODR4Q5SWX8 454 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 RBM23Q86U06 439 aaKnown RBP16.04■□□□□ 0.16
CDR2-204ENST00000564542 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 TMEM40Q8WWA1 233 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 EDAQ92838 391 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 ZNF302Q9NR11 478 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 TLR9Q9NR96 1032 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 TMEM260Q9NX78 707 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
CDR2-204ENST00000564542 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
CDR2-204ENST00000564542 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
CDR2-204ENST00000564542 ZBTB42B2RXF5 422 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 FAM86B1E9PN63 330 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 GPR182O15218 404 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 FAM86B2P0C5J1 330 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 IBSPP21815 317 aaPredicted RBP16.03■□□□□ 0.16
CDR2-204ENST00000564542 ZNF484Q5JVG2 852 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 SPOUT1Q5T280 376 aaKnown RBP16.03■□□□□ 0.16
CDR2-204ENST00000564542 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 PDXDC2PQ6P474 469 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 ADAM2Q99965 735 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 TLE6Q9H808 572 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 CDHR5Q9HBB8 845 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 BRPF3Q9ULD4 1205 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 ST3GAL5Q9UNP4 418 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 USP15Q9Y4E8 981 aaPredicted RBP16.03■□□□□ 0.16
CDR2-204ENST00000564542 TECTAO75443 2155 aa16.03■□□□□ 0.16
CDR2-204ENST00000564542 IGLV3-22A0A075B6J6 115 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 GOLGA8AA7E2F4 631 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 TBKBP1A7MCY6 615 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 C9IYK1 514 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 IPO5O00410 1097 aaKnown RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 DHX15O43143 795 aaKnown RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 C22orf31O95567 290 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 RCAN1P53805 252 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 IRX6P78412 446 aaPredicted RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 EXOSC10Q01780 885 aaKnown RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 CBX2Q14781 532 aaPredicted RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 FAM102BQ5T8I3 360 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 DHX32Q7L7V1 743 aaKnown RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 BMP8AQ7Z5Y6 402 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 PLA2G4DQ86XP0 818 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 CRYGNQ8WXF5 182 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 TCEANC2Q96MN5 208 aa16.02■□□□□ 0.16
CDR2-204ENST00000564542 CDCA3Q99618 268 aaPredicted RBP16.02■□□□□ 0.16
CDR2-204ENST00000564542 FGF18O76093 207 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 CYP3A4P08684 503 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 ATP4AP20648 1035 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 SETQ01105 290 aaPredicted RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 DUSP6Q16828 381 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 KIZQ2M2Z5 673 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 PDE12Q6L8Q7 609 aaKnown RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 SWSAP1Q6NVH7 229 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 COLGALT1Q8NBJ5 622 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 MICAL1Q8TDZ2 1067 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 OSMRQ99650 979 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 PHF7Q9BWX1 381 aaPredicted RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 TMEM161AQ9NX61 479 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 MAFBQ9Y5Q3 323 aaPredicted RBP16.01■□□□□ 0.15
CDR2-204ENST00000564542 EVPLQ92817 2033 aa16.01■□□□□ 0.15
CDR2-204ENST00000564542 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
CDR2-204ENST00000564542 FSCN2O14926 492 aa16■□□□□ 0.15
CDR2-204ENST00000564542 PER2O15055 1255 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms