RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 A0A1B0GUL6 1792 aa5.37□□□□□ -1.55
CAPN3-212ENST00000564503 A0A087WWV3 80 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 CCDC151A5D8V7 595 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 VWA3AA6NCI4 1184 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 RNMTO43148 476 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 KCNQ3O43525 872 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 DHX16O60231 1041 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 PPP6R2O75170 966 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 EIF3JO75822 258 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 SEC31AO94979 1220 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 BPNT1O95861 308 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 SERPINC1P01008 464 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 ESR1P03372 595 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 IVLP07476 585 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 ERCC3P19447 782 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 PDIA3P30101 505 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 CCT2P78371 535 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 NEXNQ0ZGT2 675 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TUBB2AQ13885 445 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 AMOTQ4VCS5 1084 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TMEM67Q5HYA8 995 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TMEM201Q5SNT2 666 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 ANO1Q5XXA6 986 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 ZNF530Q6P9A1 599 aaPredicted RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 LEKR1Q6ZMV7 388 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 SYNE3Q6ZMZ3 975 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 CCDC129Q6ZRS4 1044 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TMPRSS7Q7RTY8 843 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 USHBP1Q8N6Y0 703 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 JMYQ8N9B5 988 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 KBTBD3Q8NAB2 608 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 CCDC191Q8NCU4 936 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 FAM13CQ8NE31 585 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 CYB5D2Q8WUJ1 264 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 C8orf76Q96K31 380 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 FAM84AQ96KN4 292 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 RHOVQ96L33 236 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 ALPK1Q96QP1 1244 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TUBB2BQ9BVA1 445 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 UTP14AQ9BVJ6 771 aaKnown RBP5.36□□□□□ -1.55
CAPN3-212ENST00000564503 LRRC2Q9BYS8 371 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 SIL1Q9H173 461 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 SLAMF8Q9P0V8 285 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 VTI1BQ9UEU0 232 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TUBE1Q9UJT0 475 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 MRFAP1Q9Y605 127 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 CLIC4Q9Y696 253 aa5.36□□□□□ -1.55
CAPN3-212ENST00000564503 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ZNF142P52746 1687 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 PLCH1Q4KWH8 1693 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 LRP6O75581 1613 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 MAP3K15Q6ZN16 1313 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 FAM237AA0A1B0GTK4 181 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 E7EWF7 191 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 MAP2K7O14733 419 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 STX10O60499 249 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ERLIN1O75477 346 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 GLI1P08151 1106 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 FDPSP14324 419 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 PFKFB1P16118 471 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ACTN2P35609 894 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 SYKP43405 635 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 TNNT3P45378 269 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 RFX5P48382 616 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 YARSP54577 528 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 GNG11P61952 73 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ST5P78524 1137 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 GUCY1B3Q02153 619 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 TBX2Q13207 712 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 GNL2Q13823 731 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 MLECQ14165 292 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 PROSER3Q2NL68 480 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 CFAP100Q494V2 611 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 C1orf141Q5JVX7 400 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 SRLQ86TD4 932 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 TMEM139Q8IV31 216 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ELOA2Q8IYF1 753 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 CEP112Q8N8E3 955 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 HNRNPLLQ8WVV9 542 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ERCC4Q92889 916 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 SYTL4Q96C24 671 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 EDC3Q96F86 508 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 CCDC120Q96HB5 630 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 SEC62Q99442 399 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 SLC38A3Q99624 504 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 BAG1Q99933 345 aaPredicted RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 FUT8Q9BYC5 575 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 PARD6BQ9BYG5 372 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 GBP3Q9H0R5 595 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ACBD3Q9H3P7 528 aa5.35□□□□□ -1.55
CAPN3-212ENST00000564503 HOOK1Q9UJC3 728 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 DBNLQ9UJU6 430 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 BAZ2AQ9UIF9 1905 aaKnown RBP5.35□□□□□ -1.55
CAPN3-212ENST00000564503 ITGB4P16144 1822 aa5.34□□□□□ -1.55
CAPN3-212ENST00000564503 LAMB2P55268 1798 aa5.34□□□□□ -1.55
CAPN3-212ENST00000564503 SHANK3Q9BYB0 1731 aa5.34□□□□□ -1.55
CAPN3-212ENST00000564503 RREB1Q92766 1687 aa5.34□□□□□ -1.55
CAPN3-212ENST00000564503 CPDO75976 1380 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms