RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 PPFIA3O75145 1194 aa27.09■■□□□ 1.93
NME3-206ENST00000564252 CIITAP33076 1130 aa27.09■■□□□ 1.93
NME3-206ENST00000564252 CDHR5Q9HBB8 845 aa27.09■■□□□ 1.93
NME3-206ENST00000564252 MYH9P35579 1960 aaKnown RBP27.08■■□□□ 1.93
NME3-206ENST00000564252 REC8O95072 547 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 MMP1P03956 469 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 STAG3L1P0CL83 205 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 IFNAR1P17181 557 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 PSMA5P28066 241 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 EVCP57679 992 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 AKAP17AQ02040 695 aaKnown RBP27.08■■□□□ 1.93
NME3-206ENST00000564252 PUS10Q3MIT2 529 aaKnown RBP27.08■■□□□ 1.93
NME3-206ENST00000564252 PRR16Q569H4 304 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 SMAP1Q8IYB5 467 aaPredicted RBP27.08■■□□□ 1.93
NME3-206ENST00000564252 BICD2Q8TD16 824 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 TMEM40Q8WWA1 233 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 BBXQ8WY36 941 aaPredicted RBP27.08■■□□□ 1.93
NME3-206ENST00000564252 LENG9Q96B70 501 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 CCDC136Q96JN2 1154 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 ERVK-5Q9HDB9 667 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 GINS2Q9Y248 185 aa27.08■■□□□ 1.93
NME3-206ENST00000564252 NOC2LQ9Y3T9 749 aaKnown RBP27.08■■□□□ 1.93
NME3-206ENST00000564252 C22orf31O95567 290 aa27.07■■□□□ 1.92
NME3-206ENST00000564252 PDIA3P30101 505 aaKnown RBP27.07■■□□□ 1.92
NME3-206ENST00000564252 CCDC148Q8NFR7 591 aa27.07■■□□□ 1.92
NME3-206ENST00000564252 P2RX5Q93086 422 aa27.07■■□□□ 1.92
NME3-206ENST00000564252 SLC26A6Q9BXS9 759 aa27.07■■□□□ 1.92
NME3-206ENST00000564252 NCOA5Q9HCD5 579 aaKnown RBP27.07■■□□□ 1.92
NME3-206ENST00000564252 CLDND1Q9NY35 253 aa27.07■■□□□ 1.92
NME3-206ENST00000564252 PLAGL2Q9UPG8 496 aa27.07■■□□□ 1.92
NME3-206ENST00000564252 NCK2O43639 380 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 EDIL3O43854 480 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 MGEA5O60502 916 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 RPS6KA5O75582 802 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 LTBRP36941 435 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 SARSP49591 514 aaKnown RBP27.06■■□□□ 1.92
NME3-206ENST00000564252 GATMP50440 423 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 CCT2P78371 535 aaKnown RBP27.06■■□□□ 1.92
NME3-206ENST00000564252 HYAL1Q12794 435 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 NFX1Q12986 1120 aaKnown RBP27.06■■□□□ 1.92
NME3-206ENST00000564252 CAMK1Q14012 370 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 CTC1Q2NKJ3 1217 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 PAN2Q504Q3 1202 aaKnown RBP27.06■■□□□ 1.92
NME3-206ENST00000564252 FAM43BQ6ZT52 329 aaPredicted RBP27.06■■□□□ 1.92
NME3-206ENST00000564252 EP400NLQ6ZTU2 488 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 CKAP2LQ8IYA6 745 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 GJD3Q8N144 294 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 ALG13Q9NP73 1137 aaKnown RBP27.06■■□□□ 1.92
NME3-206ENST00000564252 VPS54Q9P1Q0 977 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 PCDHA10Q9Y5I2 948 aa27.06■■□□□ 1.92
NME3-206ENST00000564252 PSAPP07602 524 aa27.05■■□□□ 1.92
NME3-206ENST00000564252 NAALADL2Q58DX5 795 aa27.05■■□□□ 1.92
NME3-206ENST00000564252 LRFN3Q9BTN0 628 aa27.05■■□□□ 1.92
NME3-206ENST00000564252 WDR81Q562E7 1941 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 C5orf42Q9H799 3197 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 PI4K2BG5E9Z4 385 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 ITGB1P05556 798 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 TOB2Q14106 344 aaPredicted RBP27.04■■□□□ 1.92
NME3-206ENST00000564252 KIZQ2M2Z5 673 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 C11orf16Q9NQ32 467 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 GABBR1Q9UBS5 961 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 TCEAL9Q9UHQ7 104 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 LRFN2Q9ULH4 789 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 ST3GAL5Q9UNP4 418 aa27.04■■□□□ 1.92
NME3-206ENST00000564252 CSPG5O95196 566 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 DNAJB1P25685 340 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 RUFY3Q7L099 469 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 TRMT1LQ7Z2T5 733 aaKnown RBP27.03■■□□□ 1.92
NME3-206ENST00000564252 SPPL3Q8TCT6 385 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 PPP1R16BQ96T49 567 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 ADAM2Q99965 735 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 ZSWIM6Q9HCJ5 1215 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 SH3GLB2Q9NR46 395 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 RGS18Q9NS28 235 aa27.03■■□□□ 1.92
NME3-206ENST00000564252 MSH4O15457 936 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 GPR32O75388 356 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 VTNP04004 478 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 CRYBB1P53674 252 aaPredicted RBP27.02■■□□□ 1.92
NME3-206ENST00000564252 TMEM31Q5JXX7 168 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 ODR4Q5SWX8 454 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 FAM228AQ86W67 206 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 METTL13Q8N6R0 699 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 KLHL23Q8NBE8 558 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 OSMRQ99650 979 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 PCDHB7Q9Y5E2 793 aa27.02■■□□□ 1.92
NME3-206ENST00000564252 FNDC1Q4ZHG4 1894 aaPredicted RBP27.02■■□□□ 1.92
NME3-206ENST00000564252 DENND3A2RUS2 1198 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 WDR64B1ANS9 1081 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 GPR182O15218 404 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 EPB41L2O43491 1005 aaKnown RBP27.01■■□□□ 1.91
NME3-206ENST00000564252 GPR37L1O60883 481 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 IBSPP21815 317 aaPredicted RBP27.01■■□□□ 1.91
NME3-206ENST00000564252 SSTR3P32745 418 aaPredicted RBP27.01■■□□□ 1.91
NME3-206ENST00000564252 GTF2F1P35269 517 aaKnown RBP eCLIP27.01■■□□□ 1.914e-7■■■□□ 18.9
NME3-206ENST00000564252 USP11P51784 963 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 DLX2Q07687 328 aaPredicted RBP27.01■■□□□ 1.91
NME3-206ENST00000564252 FAM167AQ96KS9 214 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 C1orf112Q9NSG2 853 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 CEP131Q9UPN4 1083 aa27.01■■□□□ 1.91
NME3-206ENST00000564252 FAM50BQ9Y247 325 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms