RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 MROH7Q68CQ1 1323 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 TRANK1O15050 2925 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
UBFD1-203ENST00000564106 TXNP10599 105 aaKnown RBP10.88□□□□□ -0.67
UBFD1-203ENST00000564106 PPP1R2P41236 205 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 SARSP49591 514 aaKnown RBP10.88□□□□□ -0.67
UBFD1-203ENST00000564106 RABGGTBP53611 331 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 SP2Q02086 613 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 TTLL4Q14679 1199 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 KARSQ15046 597 aaKnown RBP10.88□□□□□ -0.67
UBFD1-203ENST00000564106 CEP55Q53EZ4 464 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 PRR16Q569H4 304 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 OTOP2Q7RTS6 562 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 DNERQ8NFT8 737 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 SNX29Q8TEQ0 813 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 PAGE5Q96GU1 130 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 RMDN3Q96TC7 470 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 PANK2Q9BZ23 570 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 CBX8Q9HC52 389 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 IL23AQ9NPF7 189 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 PXMP2Q9NR77 195 aa10.88□□□□□ -0.67
UBFD1-203ENST00000564106 A0A087X0B3 334 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 DLL1O00548 723 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 IKBKBO14920 756 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 CABYRO75952 493 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 MMP3P08254 477 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 PLCG1P19174 1290 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 DPYDQ12882 1025 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 PPIGQ13427 754 aaKnown RBP eCLIP10.87□□□□□ -0.67
UBFD1-203ENST00000564106 ADGRE1Q14246 886 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 DPCR1Q3MIW9 517 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 HYIQ5T013 277 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 PCNX4Q63HM2 1172 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 GDF6Q6KF10 455 aaPredicted RBP10.87□□□□□ -0.67
UBFD1-203ENST00000564106 ETNPPLQ8TBG4 499 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 SCFD2Q8WU76 684 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 HERVK_113Q902F9 699 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 HAS1Q92839 578 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
UBFD1-203ENST00000564106 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 KBTBD4Q9NVX7 518 aa10.87□□□□□ -0.67
UBFD1-203ENST00000564106 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 LOC102724159A0A0B4J2E5 919 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 POTEMA6NI47 508 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 B4DLN1 442 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 FAM86B1E9PN63 330 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 BIN1O00499 593 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 TLR3O15455 904 aaKnown RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 EDIL3O43854 480 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 STAM2O75886 525 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 NR3C2P08235 984 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 MUTP22033 750 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 AFMP43652 599 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 CHMP4BP1P59074 171 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 MORC3Q14149 939 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 KCNB1Q14721 858 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 PWP2Q15269 919 aaKnown RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 FAM47CQ5HY64 1035 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 SV2BQ7L1I2 683 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 DEFB128Q7Z7B8 93 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 TMEM199Q8N511 208 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 MAFAQ8NHW3 353 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 LARP4BQ92615 738 aaKnown RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 LENG9Q96B70 501 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 TIFAQ96CG3 184 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 PDLIM2Q96JY6 352 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 RIT2Q99578 217 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 NKX2-4Q9H2Z4 354 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 PRDM12Q9H4Q4 367 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 ZNF576Q9H609 170 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 DDX41Q9UJV9 622 aaKnown RBP10.86□□□□□ -0.67
UBFD1-203ENST00000564106 MAN1B1Q9UKM7 699 aa10.86□□□□□ -0.67
UBFD1-203ENST00000564106 COL4A4P53420 1690 aaPredicted RBP10.85□□□□□ -0.67
UBFD1-203ENST00000564106 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.85□□□□□ -0.67
UBFD1-203ENST00000564106 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.85□□□□□ -0.67
UBFD1-203ENST00000564106 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 PP2D1A8MPX8 630 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 MEIS1O00470 390 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 MSH4O15457 936 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 MAFGO15525 162 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 RPN1P04843 607 aaKnown RBP10.85□□□□□ -0.67
UBFD1-203ENST00000564106 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 ERCC5P28715 1186 aaPredicted RBP10.85□□□□□ -0.67
UBFD1-203ENST00000564106 CCND2P30279 289 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 CDC25AP30304 524 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 CCT6AP40227 531 aaKnown RBP10.85□□□□□ -0.67
UBFD1-203ENST00000564106 CPT1AP50416 773 aa10.85□□□□□ -0.67
UBFD1-203ENST00000564106 MRPS9P82933 396 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms