RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 XIRP1Q702N8 1843 aaKnown RBP13.82□□□□□ -0.2
CCDC187-201ENST00000563590 PJA2O43164 708 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 NTSR2O95665 410 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 WLSQ5T9L3 541 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
CCDC187-201ENST00000563590 CD302Q8IX05 232 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 MREGQ8N565 214 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 DDX23Q9BUQ8 820 aaKnown RBP13.82□□□□□ -0.2
CCDC187-201ENST00000563590 DCP1AQ9NPI6 582 aaPredicted RBP13.82□□□□□ -0.2
CCDC187-201ENST00000563590 LRRC4BQ9NT99 713 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 COL18A1P39060 1754 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 GSTTP1A0A1W2PQM5 241 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 VPS41P49754 854 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
CCDC187-201ENST00000563590 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 ZNF449Q6P9G9 518 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 C6orf89Q6UWU4 347 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 VPS36Q86VN1 386 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 ERICH1Q86X53 443 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 IFT74Q96LB3 600 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 PIGSQ96S52 555 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 FGFR1OP2Q9NVK5 253 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 FLT1P17948 1338 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 SHBGP04278 402 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 NEFHP12036 1026 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 FGFR4P22455 802 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
CCDC187-201ENST00000563590 TATDN2Q93075 761 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 EYA3Q99504 573 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 PLCB1Q9NQ66 1216 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 ACTN1P12814 892 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 ALDH5A1P51649 535 aaPredicted RBP13.81□□□□□ -0.2
CCDC187-201ENST00000563590 IFI35P80217 286 aaPredicted RBP13.81□□□□□ -0.2
CCDC187-201ENST00000563590 CUL1Q13616 776 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 ASTE1Q2TB18 679 aaPredicted RBP13.81□□□□□ -0.2
CCDC187-201ENST00000563590 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 CTNNBL1Q8WYA6 563 aaPredicted RBP13.81□□□□□ -0.2
CCDC187-201ENST00000563590 GLG1Q92896 1179 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 ISCUQ9H1K1 167 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 RNF14Q9UBS8 474 aa13.81□□□□□ -0.2
CCDC187-201ENST00000563590 TCP11X1B4DZS4 312 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 SORBS3O60504 671 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 BTDP43251 543 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 EMC10Q5UCC4 262 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ZMYND12Q9H0C1 365 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 POTEMA6NI47 508 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ACSL3O95573 720 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 RANBP1P43487 201 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 CTCFP49711 727 aaPredicted RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 HGSNATQ68CP4 663 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 AMIGO3Q86WK7 504 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 RDH13Q8NBN7 331 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ETNK1Q9HBU6 452 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 DUOX1Q9NRD9 1551 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 MEIS1O00470 390 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 SERPING1P05155 500 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 HSPA9P38646 679 aaKnown RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 SSR1P43307 286 aaKnown RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ARMC9Q7Z3E5 817 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 RNF10Q8N5U6 811 aaKnown RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ZNF483Q8TF39 744 aaPredicted RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 INPP4AQ96PE3 977 aaPredicted RBP13.8□□□□□ -0.2
CCDC187-201ENST00000563590 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
CCDC187-201ENST00000563590 ORC4O43929 436 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
CCDC187-201ENST00000563590 SP4Q02446 784 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 UAP1Q16222 522 aaPredicted RBP13.79□□□□□ -0.2
CCDC187-201ENST00000563590 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 HERC4Q5GLZ8 1057 aaPredicted RBP13.79□□□□□ -0.2
CCDC187-201ENST00000563590 CENPPQ6IPU0 288 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
CCDC187-201ENST00000563590 NEK9Q8TD19 979 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 IQCDQ96DY2 449 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 BRIP1Q9BX63 1249 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 A0A1W2PRG0 241 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 SLC30A9Q6PML9 568 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC187-201ENST00000563590 DAAM1Q9Y4D1 1078 aa13.79□□□□□ -0.2
CCDC187-201ENST00000563590 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
CCDC187-201ENST00000563590 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 TLR2O60603 784 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 SUN1O94901 812 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 DRD4P21917 467 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 TMEM266Q2M3C6 531 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 CCT6BQ92526 530 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 BCORQ6W2J9 1755 aa13.78□□□□□ -0.2
CCDC187-201ENST00000563590 DDX39AO00148 427 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms