RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 KLRC1P26715 233 aa16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 PRKCEQ02156 737 aa16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 LINC01599Q8WXQ3 324 aa16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 MYLIPQ8WY64 445 aa16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 BACH2Q9BYV9 841 aa16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 WRAP73Q9P2S5 460 aaPredicted RBP16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 SQORQ9Y6N5 450 aa16.7■□□□□ 0.26
RPUSD1-204ENST00000563560 LCHNA4D1U4 455 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 KIF28PB7ZC32 967 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 CHMP2AO43633 222 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 CCNT1O60563 726 aaKnown RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 EFCAB14O75071 495 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 OATP04181 439 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 RPLP2P05387 115 aaKnown RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 CA3P07451 260 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 TAP1Q03518 808 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 IKBKEQ14164 716 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 TMEM40Q8WWA1 233 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 TNPO1Q92973 898 aaKnown RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 MTMR9Q96QG7 549 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 NIFKQ9BYG3 293 aaKnown RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 CDHR5Q9HBB8 845 aa16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 RC3H2Q9HBD1 1191 aaKnown RBP16.69■□□□□ 0.26
RPUSD1-204ENST00000563560 MUC3AQ02505 3323 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 FNDC1Q4ZHG4 1894 aaPredicted RBP16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 IGKV6-21A0A0C4DH24 114 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 GPR32O75388 356 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 GHRP10912 638 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 FOSBP53539 338 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 HMGN5P82970 282 aaKnown RBP16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 TSHZ1Q6ZSZ6 1077 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 ANO5Q75V66 913 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 MIER3Q7Z3K6 550 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 RTN4RL1Q86UN2 441 aaPredicted RBP16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 NME8Q8N427 588 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 APBB2Q92870 758 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 TMX3Q96JJ7 454 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 IFIH1Q9BYX4 1025 aaKnown RBP16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 CELF4Q9BZC1 486 aaKnown RBP16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 FAM49AQ9H0Q0 323 aaPredicted RBP16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 MSRAQ9UJ68 235 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 TRPV2Q9Y5S1 764 aa16.68■□□□□ 0.26
RPUSD1-204ENST00000563560 TMEM150BA6NC51 233 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 EPOPA6NHQ4 379 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 LINC00271P0C7V0 271 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 GUCY1B3Q02153 619 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 TMEM62Q0P6H9 643 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 SEPT8Q92599 483 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 TOP1MTQ969P6 601 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 NAP1L4Q99733 375 aaKnown RBP16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 TMEM60Q9H2L4 133 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 FOXP1Q9H334 677 aaPredicted RBP16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 TMX1Q9H3N1 280 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 SAMM50Q9Y512 469 aa16.67■□□□□ 0.26
RPUSD1-204ENST00000563560 PRRC2BQ5JSZ5 2229 aaKnown RBP16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 KCNJ6P48051 423 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 IER5Q5VY09 327 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 RSPH3Q86UC2 560 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 C8orf76Q96K31 380 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 ADAMTS10Q9H324 1103 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 PRDM12Q9H4Q4 367 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
RPUSD1-204ENST00000563560 ENPP3O14638 875 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 CD52P31358 61 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 DRP2Q13474 957 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 EPHA7Q15375 998 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 XKR3Q5GH77 459 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 PPP2R2DQ66LE6 453 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 C4orf32Q8N8J7 132 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 USP38Q8NB14 1042 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 BANK1Q8NDB2 785 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 RAD9AQ99638 391 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 HSD17B14Q9BPX1 270 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 SLC28A3Q9HAS3 691 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 ERVK-5Q9HDB9 667 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 PADI3Q9ULW8 664 aa16.65■□□□□ 0.26
RPUSD1-204ENST00000563560 LINC01553A4QN01 128 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 MAGEB2O15479 319 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 TLL1O43897 1013 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 ST18O60284 1047 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 LPXNO60711 386 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 POU3F3P20264 500 aaPredicted RBP16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 TOB1P50616 345 aaPredicted RBP16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 CLCN3P51790 818 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 PSMC5P62195 406 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 NRBP2Q9NSY0 501 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
RPUSD1-204ENST00000563560 MGEA5O60502 916 aa16.63■□□□□ 0.25
RPUSD1-204ENST00000563560 SLITRK3O94933 977 aa16.63■□□□□ 0.25
RPUSD1-204ENST00000563560 AMHP03971 560 aa16.63■□□□□ 0.25
RPUSD1-204ENST00000563560 VTNP04004 478 aa16.63■□□□□ 0.25
RPUSD1-204ENST00000563560 P4HBP07237 508 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms