RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 NKTRP30414 1462 aaKnown RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 PIK3C2GO75747 1445 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 PTPRGP23470 1445 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 NUP160Q12769 1436 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 TRPM1Q7Z4N2 1603 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 NPC1L1Q9UHC9 1359 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 ZNF536O15090 1300 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 LETM1O95202 739 aaPredicted RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 CNOT4O95628 575 aaKnown RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 MSNP26038 577 aaKnown RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 PAN2Q504Q3 1202 aaKnown RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 CLEC17AQ6ZS10 378 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 SPATC1Q76KD6 591 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 TRMT2AQ8IZ69 625 aaKnown RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 PMFBP1Q8TBY8 1022 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 DLL4Q9NR61 685 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 ABCC5O15440 1437 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 PRDM15P57071 1507 aaPredicted RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 ABCC10Q5T3U5 1492 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 AGRPO00253 132 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 KRIT1O00522 736 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 CKMP06732 381 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 RBM25P49756 843 aaKnown RBP4.29□□□□□ -1.72
LINC01416-201ENST00000563553 C1QTNF8P60827 252 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 PPP2CBP62714 309 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 PPP2CAP67775 309 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 SKIDA1Q1XH10 827 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 TRMT10BQ6PF06 316 aaKnown RBP4.29□□□□□ -1.72
LINC01416-201ENST00000563553 GLB1LQ6UWU2 654 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 ST13P5Q8NFI4 369 aaPredicted RBP4.29□□□□□ -1.72
LINC01416-201ENST00000563553 SNX21Q969T3 373 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 CCDC94Q9BW85 323 aaPredicted RBP4.29□□□□□ -1.72
LINC01416-201ENST00000563553 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 LRP5O75197 1615 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 ADCY10Q96PN6 1610 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 RTEL1-TNFRSF6BF6WH68 1400 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 SOD2P04179 222 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 C6orf222P0C671 652 aaPredicted RBP4.29□□□□□ -1.72
LINC01416-201ENST00000563553 DDIT3P35638 169 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 GPR85P60893 370 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 KIZQ2M2Z5 673 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 FOXB2Q5VYV0 432 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 KCNJ15Q99712 375 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 ZFYVE21Q9BQ24 234 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 SCAND2PQ9GZW5 306 aaPredicted RBP4.29□□□□□ -1.72
LINC01416-201ENST00000563553 IPPKQ9H8X2 491 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 ZFP69BQ9UJL9 534 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 PTPN22Q9Y2R2 807 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 TRAF6Q9Y4K3 522 aa4.29□□□□□ -1.72
LINC01416-201ENST00000563553 ZNF839A8K0R7 811 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 B4GALT4O60513 344 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 YY1P25490 414 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 CSF2RBP32927 897 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 RIPK4P57078 832 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 PFKPQ01813 784 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 VASNQ6EMK4 673 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 SASS6Q6UVJ0 657 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 NSMFQ6X4W1 530 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 Q6ZUG5 572 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 TRIM48Q8IWZ4 208 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 STPG3Q8N7X2 389 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC01416-201ENST00000563553 WRNIP1Q96S55 665 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 CD244Q9BZW8 370 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 KATNBL1Q9H079 304 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 KLC2Q9H0B6 622 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 NOL7Q9UMY1 257 aaKnown RBP4.28□□□□□ -1.72
LINC01416-201ENST00000563553 CADPSQ9ULU8 1353 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 SYNMO15061 1565 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 GOLGA6L22H0YM25 854 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 MAFKO60675 156 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 HSP90AB1P08238 724 aaKnown RBP4.28□□□□□ -1.72
LINC01416-201ENST00000563553 FAM193AP78312 1265 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 CNGB1Q14028 1251 aaPredicted RBP4.28□□□□□ -1.72
LINC01416-201ENST00000563553 SURF1Q15526 300 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 SMAD2Q15796 467 aaKnown RBP4.28□□□□□ -1.72
LINC01416-201ENST00000563553 TAF7LQ5H9L4 462 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 KCTD1Q719H9 257 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 GPR155Q7Z3F1 870 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.28□□□□□ -1.72
LINC01416-201ENST00000563553 PLEKHH3Q7Z736 793 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 HSCBQ8IWL3 235 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 SMC5Q8IY18 1101 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 AJUBAQ96IF1 538 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 PANK2Q9BZ23 570 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 RRP7BPQ9NSQ0 103 aa4.28□□□□□ -1.72
LINC01416-201ENST00000563553 IQGAP2Q13576 1575 aa4.28□□□□□ -1.73
LINC01416-201ENST00000563553 RNF17Q9BXT8 1623 aaKnown RBP4.27□□□□□ -1.73
LINC01416-201ENST00000563553 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.27□□□□□ -1.73
LINC01416-201ENST00000563553 WNT9AO14904 365 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 GNAT1P11488 350 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 HMGN5P82970 282 aaKnown RBP4.27□□□□□ -1.73
LINC01416-201ENST00000563553 SLFN5Q08AF3 891 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 IPO4Q8TEX9 1081 aaKnown RBP4.27□□□□□ -1.73
LINC01416-201ENST00000563553 PDLIM2Q96JY6 352 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 DSEQ9UL01 958 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 KIF16BQ96L93 1317 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 KIAA0586Q9BVV6 1533 aa4.27□□□□□ -1.73
LINC01416-201ENST00000563553 FAM90A27PA6NNH2 459 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms